Gene : AT5G16930 A. thaliana TAIR10
Defline:  (1 of 3) K17681 - ATPase family AAA domain-containing protein 3A/B (ATAD3A_B) Genomic Order:  1599
Name:  ? AT5G16930 Secondary Identifier:  ? PAC:19670863
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16930 0.5kb upstream 0.5kb upstream 3967 true Chr5: 5567893-5571859 Arabidopsis thaliana
AT5G16930 0.5kb upstream 0.5kb upstream 500 false Chr5: 5567893-5568392 Arabidopsis thaliana
AT5G16930 0.5kb downstream 0.5kb downstream 3967 true Chr5: 5568393-5572359 Arabidopsis thaliana
AT5G16930 0.5kb downstream 0.5kb downstream 500 false Chr5: 5571860-5572359 Arabidopsis thaliana
AT5G16930 1.0kb upstream 1.0kb upstream 4467 true Chr5: 5567393-5571859 Arabidopsis thaliana
AT5G16930 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5567393-5568392 Arabidopsis thaliana
AT5G16930 1.0kb downstream 1.0kb downstream 4467 true Chr5: 5568393-5572859 Arabidopsis thaliana
AT5G16930 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5571860-5572859 Arabidopsis thaliana
AT5G16930 2.0kb upstream 2.0kb upstream 5467 true Chr5: 5566393-5571859 Arabidopsis thaliana
AT5G16930 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5566393-5568392 Arabidopsis thaliana
AT5G16930 2.0kb downstream 2.0kb downstream 5467 true Chr5: 5568393-5573859 Arabidopsis thaliana
AT5G16930 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5571860-5573859 Arabidopsis thaliana
AT5G16930 5.0kb upstream 5.0kb upstream 8467 true Chr5: 5563393-5571859 Arabidopsis thaliana
AT5G16930 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5563393-5568392 Arabidopsis thaliana
AT5G16930 5.0kb downstream 5.0kb downstream 8467 true Chr5: 5568393-5576859 Arabidopsis thaliana
AT5G16930 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5571860-5576859 Arabidopsis thaliana
AT5G16930 10.0kb upstream 10.0kb upstream 13467 true Chr5: 5558393-5571859 Arabidopsis thaliana
AT5G16930 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5558393-5568392 Arabidopsis thaliana
AT5G16930 10.0kb downstream 10.0kb downstream 13467 true Chr5: 5568393-5581859 Arabidopsis thaliana
AT5G16930 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5571860-5581859 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369070 5261 Brassicaceae View MSA
123836696 5264 Brassicales-Malvales View MSA
124336969 5266 SBM View MSA
124240183 5268 Malvidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.115        
cufflinks 3.537        
cufflinks 2.201        
cufflinks 4.394        
cufflinks 1.8       Low
cufflinks 4.798       High

0 Strain