Gene : AT5G16960 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11695//PTHR11695:SF564 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1602
Name:  ? AT5G16960 Secondary Identifier:  ? PAC:19670095
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16960 0.5kb upstream 0.5kb upstream 2130 true Chr5: 5574281-5576410 Arabidopsis thaliana
AT5G16960 0.5kb upstream 0.5kb upstream 500 false Chr5: 5575911-5576410 Arabidopsis thaliana
AT5G16960 0.5kb downstream 0.5kb downstream 2130 true Chr5: 5573781-5575910 Arabidopsis thaliana
AT5G16960 0.5kb downstream 0.5kb downstream 500 false Chr5: 5573781-5574280 Arabidopsis thaliana
AT5G16960 1.0kb upstream 1.0kb upstream 2630 true Chr5: 5574281-5576910 Arabidopsis thaliana
AT5G16960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5575911-5576910 Arabidopsis thaliana
AT5G16960 1.0kb downstream 1.0kb downstream 2630 true Chr5: 5573281-5575910 Arabidopsis thaliana
AT5G16960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5573281-5574280 Arabidopsis thaliana
AT5G16960 2.0kb upstream 2.0kb upstream 3630 true Chr5: 5574281-5577910 Arabidopsis thaliana
AT5G16960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5575911-5577910 Arabidopsis thaliana
AT5G16960 2.0kb downstream 2.0kb downstream 3630 true Chr5: 5572281-5575910 Arabidopsis thaliana
AT5G16960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5572281-5574280 Arabidopsis thaliana
AT5G16960 5.0kb upstream 5.0kb upstream 6630 true Chr5: 5574281-5580910 Arabidopsis thaliana
AT5G16960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5575911-5580910 Arabidopsis thaliana
AT5G16960 5.0kb downstream 5.0kb downstream 6630 true Chr5: 5569281-5575910 Arabidopsis thaliana
AT5G16960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5569281-5574280 Arabidopsis thaliana
AT5G16960 10.0kb upstream 10.0kb upstream 11630 true Chr5: 5574281-5585910 Arabidopsis thaliana
AT5G16960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5575911-5585910 Arabidopsis thaliana
AT5G16960 10.0kb downstream 10.0kb downstream 11630 true Chr5: 5564281-5575910 Arabidopsis thaliana
AT5G16960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5564281-5574280 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371328 5261 Brassicaceae View MSA
123800144 5264 Brassicales-Malvales View MSA
124297592 5266 SBM View MSA
124248485 5268 Malvidae View MSA
124067817 5270 Rosid View MSA
123751695 5271 Pentapetalae View MSA
122796065 5272 Eudicot View MSA
122046784 5273 Angiosperm View MSA
121350474 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.635        
cufflinks 0.056     Low  
cufflinks 0.255     Low  
cufflinks 0.199     Low  
cufflinks 0.477        
cufflinks 0.009     Low Low

0 Strain