Gene : AT5G16950 A. thaliana TAIR10
Genomic Order:  1601 Name:  ? AT5G16950
Secondary Identifier:  ? PAC:19665777
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16950 0.5kb upstream 0.5kb upstream 995 true Chr5: 5572076-5573070 Arabidopsis thaliana
AT5G16950 0.5kb upstream 0.5kb upstream 500 false Chr5: 5572076-5572575 Arabidopsis thaliana
AT5G16950 0.5kb downstream 0.5kb downstream 995 true Chr5: 5572576-5573570 Arabidopsis thaliana
AT5G16950 0.5kb downstream 0.5kb downstream 500 false Chr5: 5573071-5573570 Arabidopsis thaliana
AT5G16950 1.0kb upstream 1.0kb upstream 1495 true Chr5: 5571576-5573070 Arabidopsis thaliana
AT5G16950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5571576-5572575 Arabidopsis thaliana
AT5G16950 1.0kb downstream 1.0kb downstream 1495 true Chr5: 5572576-5574070 Arabidopsis thaliana
AT5G16950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5573071-5574070 Arabidopsis thaliana
AT5G16950 2.0kb upstream 2.0kb upstream 2495 true Chr5: 5570576-5573070 Arabidopsis thaliana
AT5G16950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5570576-5572575 Arabidopsis thaliana
AT5G16950 2.0kb downstream 2.0kb downstream 2495 true Chr5: 5572576-5575070 Arabidopsis thaliana
AT5G16950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5573071-5575070 Arabidopsis thaliana
AT5G16950 5.0kb upstream 5.0kb upstream 5495 true Chr5: 5567576-5573070 Arabidopsis thaliana
AT5G16950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5567576-5572575 Arabidopsis thaliana
AT5G16950 5.0kb downstream 5.0kb downstream 5495 true Chr5: 5572576-5578070 Arabidopsis thaliana
AT5G16950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5573071-5578070 Arabidopsis thaliana
AT5G16950 10.0kb upstream 10.0kb upstream 10495 true Chr5: 5562576-5573070 Arabidopsis thaliana
AT5G16950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5562576-5572575 Arabidopsis thaliana
AT5G16950 10.0kb downstream 10.0kb downstream 10495 true Chr5: 5572576-5583070 Arabidopsis thaliana
AT5G16950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5573071-5583070 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370408 5261 Brassicaceae View MSA
123836283 5264 Brassicales-Malvales View MSA
124340537 5266 SBM View MSA
124242464 5268 Malvidae View MSA
124068135 5270 Rosid View MSA
123737806 5271 Pentapetalae View MSA
122789771 5272 Eudicot View MSA
122045732 5273 Angiosperm View MSA
121351447 5274 Embryophyte View MSA
123382171 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.773       High
cufflinks 10.142        
cufflinks 7.708       Low
cufflinks 11.573        
cufflinks 8.856        
cufflinks 11.887        

0 Strain