Gene : AT5G16810 A. thaliana TAIR10
Defline:  (1 of 32) 2.7.11.22//2.7.11.23 - Cyclin-dependent kinase / Cdk-activating protein kinase // [RNA-polymerase]-subunit kinase / CTD kinase Genomic Order:  1587
Name:  ? AT5G16810 Secondary Identifier:  ? PAC:19672550
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16810 0.5kb upstream 0.5kb upstream 3689 true Chr5: 5526742-5530430 Arabidopsis thaliana
AT5G16810 0.5kb upstream 0.5kb upstream 500 false Chr5: 5529931-5530430 Arabidopsis thaliana
AT5G16810 0.5kb downstream 0.5kb downstream 3689 true Chr5: 5526242-5529930 Arabidopsis thaliana
AT5G16810 0.5kb downstream 0.5kb downstream 500 false Chr5: 5526242-5526741 Arabidopsis thaliana
AT5G16810 1.0kb upstream 1.0kb upstream 4189 true Chr5: 5526742-5530930 Arabidopsis thaliana
AT5G16810 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5529931-5530930 Arabidopsis thaliana
AT5G16810 1.0kb downstream 1.0kb downstream 4189 true Chr5: 5525742-5529930 Arabidopsis thaliana
AT5G16810 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5525742-5526741 Arabidopsis thaliana
AT5G16810 2.0kb upstream 2.0kb upstream 5189 true Chr5: 5526742-5531930 Arabidopsis thaliana
AT5G16810 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5529931-5531930 Arabidopsis thaliana
AT5G16810 2.0kb downstream 2.0kb downstream 5189 true Chr5: 5524742-5529930 Arabidopsis thaliana
AT5G16810 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5524742-5526741 Arabidopsis thaliana
AT5G16810 5.0kb upstream 5.0kb upstream 8189 true Chr5: 5526742-5534930 Arabidopsis thaliana
AT5G16810 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5529931-5534930 Arabidopsis thaliana
AT5G16810 5.0kb downstream 5.0kb downstream 8189 true Chr5: 5521742-5529930 Arabidopsis thaliana
AT5G16810 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5521742-5526741 Arabidopsis thaliana
AT5G16810 10.0kb upstream 10.0kb upstream 13189 true Chr5: 5526742-5539930 Arabidopsis thaliana
AT5G16810 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5529931-5539930 Arabidopsis thaliana
AT5G16810 10.0kb downstream 10.0kb downstream 13189 true Chr5: 5516742-5529930 Arabidopsis thaliana
AT5G16810 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5516742-5526741 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361140 5261 Brassicaceae View MSA
123830862 5264 Brassicales-Malvales View MSA
124342044 5266 SBM View MSA
124240900 5268 Malvidae View MSA
124061904 5270 Rosid View MSA
123739067 5271 Pentapetalae View MSA
122790669 5272 Eudicot View MSA
122043176 5273 Angiosperm View MSA
121348060 5274 Embryophyte View MSA
123428015 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.622        
cufflinks 3.867        
cufflinks 10.353        
cufflinks 4.982        
cufflinks 12.181       High
cufflinks 2.21       Low

0 Strain