Gene : THO7 A. thaliana TAIR10
Primary Identifier:  ? AT5G16790 Defline:  (1 of 2) K13176 - THO complex subunit 7 (THOC7)
Genomic Order:  1585 Name:  ? AT5G16790
Secondary Identifier:  ? PAC:19665534
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16790 0.5kb upstream 0.5kb upstream 1969 true Chr5: 5522495-5524463 Arabidopsis thaliana
AT5G16790 0.5kb upstream 0.5kb upstream 500 false Chr5: 5523964-5524463 Arabidopsis thaliana
AT5G16790 0.5kb downstream 0.5kb downstream 1969 true Chr5: 5521995-5523963 Arabidopsis thaliana
AT5G16790 0.5kb downstream 0.5kb downstream 500 false Chr5: 5521995-5522494 Arabidopsis thaliana
AT5G16790 1.0kb upstream 1.0kb upstream 2469 true Chr5: 5522495-5524963 Arabidopsis thaliana
AT5G16790 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5523964-5524963 Arabidopsis thaliana
AT5G16790 1.0kb downstream 1.0kb downstream 2469 true Chr5: 5521495-5523963 Arabidopsis thaliana
AT5G16790 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5521495-5522494 Arabidopsis thaliana
AT5G16790 2.0kb upstream 2.0kb upstream 3469 true Chr5: 5522495-5525963 Arabidopsis thaliana
AT5G16790 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5523964-5525963 Arabidopsis thaliana
AT5G16790 2.0kb downstream 2.0kb downstream 3469 true Chr5: 5520495-5523963 Arabidopsis thaliana
AT5G16790 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5520495-5522494 Arabidopsis thaliana
AT5G16790 5.0kb upstream 5.0kb upstream 6469 true Chr5: 5522495-5528963 Arabidopsis thaliana
AT5G16790 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5523964-5528963 Arabidopsis thaliana
AT5G16790 5.0kb downstream 5.0kb downstream 6469 true Chr5: 5517495-5523963 Arabidopsis thaliana
AT5G16790 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5517495-5522494 Arabidopsis thaliana
AT5G16790 10.0kb upstream 10.0kb upstream 11469 true Chr5: 5522495-5533963 Arabidopsis thaliana
AT5G16790 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5523964-5533963 Arabidopsis thaliana
AT5G16790 10.0kb downstream 10.0kb downstream 11469 true Chr5: 5512495-5523963 Arabidopsis thaliana
AT5G16790 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5512495-5522494 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343581 5261 Brassicaceae View MSA
123836993 5264 Brassicales-Malvales View MSA
124341094 5266 SBM View MSA
124241960 5268 Malvidae View MSA
124069110 5270 Rosid View MSA
123737920 5271 Pentapetalae View MSA
122791766 5272 Eudicot View MSA
122047726 5273 Angiosperm View MSA
121351339 5274 Embryophyte View MSA
123428544 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.045        
cufflinks 2.189       High
cufflinks 2.01        
cufflinks 1.953        
cufflinks 1.768        
cufflinks 1.654       Low

0 Strain