Gene : RAD4 A. thaliana TAIR10
Primary Identifier:  ? AT5G16630 Defline:  (1 of 1) K10838 - xeroderma pigmentosum group C-complementing protein (XPC)
Genomic Order:  1569 Name:  ? AT5G16630
Secondary Identifier:  ? PAC:19667708
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16630 0.5kb upstream 0.5kb upstream 5317 true Chr5: 5454301-5459617 Arabidopsis thaliana
AT5G16630 0.5kb upstream 0.5kb upstream 500 false Chr5: 5454301-5454800 Arabidopsis thaliana
AT5G16630 0.5kb downstream 0.5kb downstream 5317 true Chr5: 5454801-5460117 Arabidopsis thaliana
AT5G16630 0.5kb downstream 0.5kb downstream 500 false Chr5: 5459618-5460117 Arabidopsis thaliana
AT5G16630 1.0kb upstream 1.0kb upstream 5817 true Chr5: 5453801-5459617 Arabidopsis thaliana
AT5G16630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5453801-5454800 Arabidopsis thaliana
AT5G16630 1.0kb downstream 1.0kb downstream 5817 true Chr5: 5454801-5460617 Arabidopsis thaliana
AT5G16630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5459618-5460617 Arabidopsis thaliana
AT5G16630 2.0kb upstream 2.0kb upstream 6817 true Chr5: 5452801-5459617 Arabidopsis thaliana
AT5G16630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5452801-5454800 Arabidopsis thaliana
AT5G16630 2.0kb downstream 2.0kb downstream 6817 true Chr5: 5454801-5461617 Arabidopsis thaliana
AT5G16630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5459618-5461617 Arabidopsis thaliana
AT5G16630 5.0kb upstream 5.0kb upstream 9817 true Chr5: 5449801-5459617 Arabidopsis thaliana
AT5G16630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5449801-5454800 Arabidopsis thaliana
AT5G16630 5.0kb downstream 5.0kb downstream 9817 true Chr5: 5454801-5464617 Arabidopsis thaliana
AT5G16630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5459618-5464617 Arabidopsis thaliana
AT5G16630 10.0kb upstream 10.0kb upstream 14817 true Chr5: 5444801-5459617 Arabidopsis thaliana
AT5G16630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5444801-5454800 Arabidopsis thaliana
AT5G16630 10.0kb downstream 10.0kb downstream 14817 true Chr5: 5454801-5469617 Arabidopsis thaliana
AT5G16630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5459618-5469617 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371964 5261 Brassicaceae View MSA
123832412 5264 Brassicales-Malvales View MSA
124340852 5266 SBM View MSA
124242768 5268 Malvidae View MSA
124051067 5270 Rosid View MSA
123738290 5271 Pentapetalae View MSA
122788160 5272 Eudicot View MSA
122049699 5273 Angiosperm View MSA
121347837 5274 Embryophyte View MSA
123425699 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.018        
cufflinks 2.984        
cufflinks 2.844        
cufflinks 3.124       High
cufflinks 2.659       Low
cufflinks 2.835        

0 Strain