Gene : AT5G16660 A. thaliana TAIR10
Genomic Order:  1572 Name:  ? AT5G16660
Secondary Identifier:  ? PAC:19672211
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16660 0.5kb upstream 0.5kb upstream 2080 true Chr5: 5465484-5467563 Arabidopsis thaliana
AT5G16660 0.5kb upstream 0.5kb upstream 500 false Chr5: 5467064-5467563 Arabidopsis thaliana
AT5G16660 0.5kb downstream 0.5kb downstream 2080 true Chr5: 5464984-5467063 Arabidopsis thaliana
AT5G16660 0.5kb downstream 0.5kb downstream 500 false Chr5: 5464984-5465483 Arabidopsis thaliana
AT5G16660 1.0kb upstream 1.0kb upstream 2580 true Chr5: 5465484-5468063 Arabidopsis thaliana
AT5G16660 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5467064-5468063 Arabidopsis thaliana
AT5G16660 1.0kb downstream 1.0kb downstream 2580 true Chr5: 5464484-5467063 Arabidopsis thaliana
AT5G16660 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5464484-5465483 Arabidopsis thaliana
AT5G16660 2.0kb upstream 2.0kb upstream 3580 true Chr5: 5465484-5469063 Arabidopsis thaliana
AT5G16660 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5467064-5469063 Arabidopsis thaliana
AT5G16660 2.0kb downstream 2.0kb downstream 3580 true Chr5: 5463484-5467063 Arabidopsis thaliana
AT5G16660 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5463484-5465483 Arabidopsis thaliana
AT5G16660 5.0kb upstream 5.0kb upstream 6580 true Chr5: 5465484-5472063 Arabidopsis thaliana
AT5G16660 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5467064-5472063 Arabidopsis thaliana
AT5G16660 5.0kb downstream 5.0kb downstream 6580 true Chr5: 5460484-5467063 Arabidopsis thaliana
AT5G16660 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5460484-5465483 Arabidopsis thaliana
AT5G16660 10.0kb upstream 10.0kb upstream 11580 true Chr5: 5465484-5477063 Arabidopsis thaliana
AT5G16660 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5467064-5477063 Arabidopsis thaliana
AT5G16660 10.0kb downstream 10.0kb downstream 11580 true Chr5: 5455484-5467063 Arabidopsis thaliana
AT5G16660 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5455484-5465483 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370036 5261 Brassicaceae View MSA
123836899 5264 Brassicales-Malvales View MSA
124322220 5266 SBM View MSA
124250757 5268 Malvidae View MSA
124067679 5270 Rosid View MSA
123738731 5271 Pentapetalae View MSA
122793697 5272 Eudicot View MSA
122047410 5273 Angiosperm View MSA
121347990 5274 Embryophyte View MSA
123425066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.245        
cufflinks 8.774        
cufflinks 35.4     High High
cufflinks 9.624        
cufflinks 29.115     High  
cufflinks 8.428        

0 Strain