Gene : AT5G16360 A. thaliana TAIR10
Defline:  (1 of 1) 2.3.1.135 - Phosphatidylcholine--retinol O-acyltransferase / Retinyl ester synthase Genomic Order:  1539
Name:  ? AT5G16360 Secondary Identifier:  ? PAC:19670203
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16360 0.5kb upstream 0.5kb upstream 1719 true Chr5: 5355082-5356800 Arabidopsis thaliana
AT5G16360 0.5kb upstream 0.5kb upstream 500 false Chr5: 5356301-5356800 Arabidopsis thaliana
AT5G16360 0.5kb downstream 0.5kb downstream 1719 true Chr5: 5354582-5356300 Arabidopsis thaliana
AT5G16360 0.5kb downstream 0.5kb downstream 500 false Chr5: 5354582-5355081 Arabidopsis thaliana
AT5G16360 1.0kb upstream 1.0kb upstream 2219 true Chr5: 5355082-5357300 Arabidopsis thaliana
AT5G16360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5356301-5357300 Arabidopsis thaliana
AT5G16360 1.0kb downstream 1.0kb downstream 2219 true Chr5: 5354082-5356300 Arabidopsis thaliana
AT5G16360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5354082-5355081 Arabidopsis thaliana
AT5G16360 2.0kb upstream 2.0kb upstream 3219 true Chr5: 5355082-5358300 Arabidopsis thaliana
AT5G16360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5356301-5358300 Arabidopsis thaliana
AT5G16360 2.0kb downstream 2.0kb downstream 3219 true Chr5: 5353082-5356300 Arabidopsis thaliana
AT5G16360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5353082-5355081 Arabidopsis thaliana
AT5G16360 5.0kb upstream 5.0kb upstream 6219 true Chr5: 5355082-5361300 Arabidopsis thaliana
AT5G16360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5356301-5361300 Arabidopsis thaliana
AT5G16360 5.0kb downstream 5.0kb downstream 6219 true Chr5: 5350082-5356300 Arabidopsis thaliana
AT5G16360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5350082-5355081 Arabidopsis thaliana
AT5G16360 10.0kb upstream 10.0kb upstream 11219 true Chr5: 5355082-5366300 Arabidopsis thaliana
AT5G16360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5356301-5366300 Arabidopsis thaliana
AT5G16360 10.0kb downstream 10.0kb downstream 11219 true Chr5: 5345082-5356300 Arabidopsis thaliana
AT5G16360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5345082-5355081 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374668 5261 Brassicaceae View MSA
123800801 5264 Brassicales-Malvales View MSA
124298171 5266 SBM View MSA
124149882 5268 Malvidae View MSA
123875603 5270 Rosid View MSA
123459397 5271 Pentapetalae View MSA
122494788 5272 Eudicot View MSA
122041742 5273 Angiosperm View MSA
121351388 5274 Embryophyte View MSA
123382148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.802        
cufflinks 433.426     High High
cufflinks 2.251        
cufflinks 259.1     High  
cufflinks 2.315        
cufflinks 331.88     High  

0 Strain