Gene : AT5G16450 A. thaliana TAIR10
Defline:  (1 of 3) 4.1.1.3 - Oxaloacetate decarboxylase / Oxaloacetate carboxy-lyase Genomic Order:  1548
Name:  ? AT5G16450 Secondary Identifier:  ? PAC:19670398
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16450 0.5kb upstream 0.5kb upstream 2077 true Chr5: 5373383-5375459 Arabidopsis thaliana
AT5G16450 0.5kb upstream 0.5kb upstream 500 false Chr5: 5373383-5373882 Arabidopsis thaliana
AT5G16450 0.5kb downstream 0.5kb downstream 2077 true Chr5: 5373883-5375959 Arabidopsis thaliana
AT5G16450 0.5kb downstream 0.5kb downstream 500 false Chr5: 5375460-5375959 Arabidopsis thaliana
AT5G16450 1.0kb upstream 1.0kb upstream 2577 true Chr5: 5372883-5375459 Arabidopsis thaliana
AT5G16450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5372883-5373882 Arabidopsis thaliana
AT5G16450 1.0kb downstream 1.0kb downstream 2577 true Chr5: 5373883-5376459 Arabidopsis thaliana
AT5G16450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5375460-5376459 Arabidopsis thaliana
AT5G16450 2.0kb upstream 2.0kb upstream 3577 true Chr5: 5371883-5375459 Arabidopsis thaliana
AT5G16450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5371883-5373882 Arabidopsis thaliana
AT5G16450 2.0kb downstream 2.0kb downstream 3577 true Chr5: 5373883-5377459 Arabidopsis thaliana
AT5G16450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5375460-5377459 Arabidopsis thaliana
AT5G16450 5.0kb upstream 5.0kb upstream 6577 true Chr5: 5368883-5375459 Arabidopsis thaliana
AT5G16450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5368883-5373882 Arabidopsis thaliana
AT5G16450 5.0kb downstream 5.0kb downstream 6577 true Chr5: 5373883-5380459 Arabidopsis thaliana
AT5G16450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5375460-5380459 Arabidopsis thaliana
AT5G16450 10.0kb upstream 10.0kb upstream 11577 true Chr5: 5363883-5375459 Arabidopsis thaliana
AT5G16450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5363883-5373882 Arabidopsis thaliana
AT5G16450 10.0kb downstream 10.0kb downstream 11577 true Chr5: 5373883-5385459 Arabidopsis thaliana
AT5G16450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5375460-5385459 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368654 5261 Brassicaceae View MSA
123838253 5264 Brassicales-Malvales View MSA
124345909 5266 SBM View MSA
124243565 5268 Malvidae View MSA
124064476 5270 Rosid View MSA
123748189 5271 Pentapetalae View MSA
122792101 5272 Eudicot View MSA
122047540 5273 Angiosperm View MSA
121351036 5274 Embryophyte View MSA
123426928 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.449       Low
cufflinks 17.348        
cufflinks 10.468        
cufflinks 18.605       High
cufflinks 11.2        
cufflinks 13.768        

0 Strain