Gene : AT5G16480 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31126//PTHR31126:SF19 - FAMILY NOT NAMED // ATYPICAL DUAL-SPECIFICITY PHOSPHATASE Genomic Order:  1552
Name:  ? AT5G16480 Secondary Identifier:  ? PAC:19668859
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16480 0.5kb upstream 0.5kb upstream 2285 true Chr5: 5381113-5383397 Arabidopsis thaliana
AT5G16480 0.5kb upstream 0.5kb upstream 500 false Chr5: 5382898-5383397 Arabidopsis thaliana
AT5G16480 0.5kb downstream 0.5kb downstream 2285 true Chr5: 5380613-5382897 Arabidopsis thaliana
AT5G16480 0.5kb downstream 0.5kb downstream 500 false Chr5: 5380613-5381112 Arabidopsis thaliana
AT5G16480 1.0kb upstream 1.0kb upstream 2785 true Chr5: 5381113-5383897 Arabidopsis thaliana
AT5G16480 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5382898-5383897 Arabidopsis thaliana
AT5G16480 1.0kb downstream 1.0kb downstream 2785 true Chr5: 5380113-5382897 Arabidopsis thaliana
AT5G16480 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5380113-5381112 Arabidopsis thaliana
AT5G16480 2.0kb upstream 2.0kb upstream 3785 true Chr5: 5381113-5384897 Arabidopsis thaliana
AT5G16480 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5382898-5384897 Arabidopsis thaliana
AT5G16480 2.0kb downstream 2.0kb downstream 3785 true Chr5: 5379113-5382897 Arabidopsis thaliana
AT5G16480 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5379113-5381112 Arabidopsis thaliana
AT5G16480 5.0kb upstream 5.0kb upstream 6785 true Chr5: 5381113-5387897 Arabidopsis thaliana
AT5G16480 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5382898-5387897 Arabidopsis thaliana
AT5G16480 5.0kb downstream 5.0kb downstream 6785 true Chr5: 5376113-5382897 Arabidopsis thaliana
AT5G16480 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5376113-5381112 Arabidopsis thaliana
AT5G16480 10.0kb upstream 10.0kb upstream 11785 true Chr5: 5381113-5392897 Arabidopsis thaliana
AT5G16480 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5382898-5392897 Arabidopsis thaliana
AT5G16480 10.0kb downstream 10.0kb downstream 11785 true Chr5: 5371113-5382897 Arabidopsis thaliana
AT5G16480 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5371113-5381112 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376093 5261 Brassicaceae View MSA
123837802 5264 Brassicales-Malvales View MSA
124336796 5266 SBM View MSA
124238787 5268 Malvidae View MSA
124069205 5270 Rosid View MSA
123742973 5271 Pentapetalae View MSA
122795531 5272 Eudicot View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.087        
cufflinks 13.284       High
cufflinks 5.111       Low
cufflinks 11.708        
cufflinks 5.021       Low
cufflinks 8.95        

0 Strain