Gene : ELF9 A. thaliana TAIR10
Primary Identifier:  ? AT5G16260 Defline:  (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1)
Genomic Order:  1527 Name:  ? AT5G16260
Secondary Identifier:  ? PAC:19672431
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16260 0.5kb upstream 0.5kb upstream 5061 true Chr5: 5310707-5315767 Arabidopsis thaliana
AT5G16260 0.5kb upstream 0.5kb upstream 500 false Chr5: 5310707-5311206 Arabidopsis thaliana
AT5G16260 0.5kb downstream 0.5kb downstream 5061 true Chr5: 5311207-5316267 Arabidopsis thaliana
AT5G16260 0.5kb downstream 0.5kb downstream 500 false Chr5: 5315768-5316267 Arabidopsis thaliana
AT5G16260 1.0kb upstream 1.0kb upstream 5561 true Chr5: 5310207-5315767 Arabidopsis thaliana
AT5G16260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5310207-5311206 Arabidopsis thaliana
AT5G16260 1.0kb downstream 1.0kb downstream 5561 true Chr5: 5311207-5316767 Arabidopsis thaliana
AT5G16260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5315768-5316767 Arabidopsis thaliana
AT5G16260 2.0kb upstream 2.0kb upstream 6561 true Chr5: 5309207-5315767 Arabidopsis thaliana
AT5G16260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5309207-5311206 Arabidopsis thaliana
AT5G16260 2.0kb downstream 2.0kb downstream 6561 true Chr5: 5311207-5317767 Arabidopsis thaliana
AT5G16260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5315768-5317767 Arabidopsis thaliana
AT5G16260 5.0kb upstream 5.0kb upstream 9561 true Chr5: 5306207-5315767 Arabidopsis thaliana
AT5G16260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5306207-5311206 Arabidopsis thaliana
AT5G16260 5.0kb downstream 5.0kb downstream 9561 true Chr5: 5311207-5320767 Arabidopsis thaliana
AT5G16260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5315768-5320767 Arabidopsis thaliana
AT5G16260 10.0kb upstream 10.0kb upstream 14561 true Chr5: 5301207-5315767 Arabidopsis thaliana
AT5G16260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5301207-5311206 Arabidopsis thaliana
AT5G16260 10.0kb downstream 10.0kb downstream 14561 true Chr5: 5311207-5325767 Arabidopsis thaliana
AT5G16260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5315768-5325767 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366551 5261 Brassicaceae View MSA
123832303 5264 Brassicales-Malvales View MSA
124341643 5266 SBM View MSA
124250188 5268 Malvidae View MSA
124064706 5270 Rosid View MSA
123741272 5271 Pentapetalae View MSA
122787667 5272 Eudicot View MSA
122045065 5273 Angiosperm View MSA
121347459 5274 Embryophyte View MSA
123427935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.007        
cufflinks 9.394        
cufflinks 6.859       Low
cufflinks 9.231        
cufflinks 7.322        
cufflinks 9.453        

0 Strain