Gene : AT5G16160 A. thaliana TAIR10
Genomic Order:  1517 Name:  ? AT5G16160
Secondary Identifier:  ? PAC:19672685
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16160 0.5kb upstream 0.5kb upstream 1412 true Chr5: 5275695-5277106 Arabidopsis thaliana
AT5G16160 0.5kb upstream 0.5kb upstream 500 false Chr5: 5276607-5277106 Arabidopsis thaliana
AT5G16160 0.5kb downstream 0.5kb downstream 1412 true Chr5: 5275195-5276606 Arabidopsis thaliana
AT5G16160 0.5kb downstream 0.5kb downstream 500 false Chr5: 5275195-5275694 Arabidopsis thaliana
AT5G16160 1.0kb upstream 1.0kb upstream 1912 true Chr5: 5275695-5277606 Arabidopsis thaliana
AT5G16160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5276607-5277606 Arabidopsis thaliana
AT5G16160 1.0kb downstream 1.0kb downstream 1912 true Chr5: 5274695-5276606 Arabidopsis thaliana
AT5G16160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5274695-5275694 Arabidopsis thaliana
AT5G16160 2.0kb upstream 2.0kb upstream 2912 true Chr5: 5275695-5278606 Arabidopsis thaliana
AT5G16160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5276607-5278606 Arabidopsis thaliana
AT5G16160 2.0kb downstream 2.0kb downstream 2912 true Chr5: 5273695-5276606 Arabidopsis thaliana
AT5G16160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5273695-5275694 Arabidopsis thaliana
AT5G16160 5.0kb upstream 5.0kb upstream 5912 true Chr5: 5275695-5281606 Arabidopsis thaliana
AT5G16160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5276607-5281606 Arabidopsis thaliana
AT5G16160 5.0kb downstream 5.0kb downstream 5912 true Chr5: 5270695-5276606 Arabidopsis thaliana
AT5G16160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5270695-5275694 Arabidopsis thaliana
AT5G16160 10.0kb upstream 10.0kb upstream 10912 true Chr5: 5275695-5286606 Arabidopsis thaliana
AT5G16160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5276607-5286606 Arabidopsis thaliana
AT5G16160 10.0kb downstream 10.0kb downstream 10912 true Chr5: 5265695-5276606 Arabidopsis thaliana
AT5G16160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5265695-5275694 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379503 5261 Brassicaceae View MSA
123837143 5264 Brassicales-Malvales View MSA
124347060 5266 SBM View MSA
124246923 5268 Malvidae View MSA
124069506 5270 Rosid View MSA
123742273 5271 Pentapetalae View MSA
122795454 5272 Eudicot View MSA
122049776 5273 Angiosperm View MSA
121311586 5274 Embryophyte View MSA
123348863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.635        
cufflinks 3.482       High
cufflinks 1.3        
cufflinks 2.72        
cufflinks 1.237       Low
cufflinks 2.422        

0 Strain