Gene : GEX3 A. thaliana TAIR10
Primary Identifier:  ? AT5G16020 Defline:  gamete-expressed 3
Genomic Order:  1502 Name:  ? AT5G16020
Secondary Identifier:  ? PAC:19671765
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16020 0.5kb upstream 0.5kb upstream 3050 true Chr5: 5229192-5232241 Arabidopsis thaliana
AT5G16020 0.5kb upstream 0.5kb upstream 500 false Chr5: 5229192-5229691 Arabidopsis thaliana
AT5G16020 0.5kb downstream 0.5kb downstream 3050 true Chr5: 5229692-5232741 Arabidopsis thaliana
AT5G16020 0.5kb downstream 0.5kb downstream 500 false Chr5: 5232242-5232741 Arabidopsis thaliana
AT5G16020 1.0kb upstream 1.0kb upstream 3550 true Chr5: 5228692-5232241 Arabidopsis thaliana
AT5G16020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5228692-5229691 Arabidopsis thaliana
AT5G16020 1.0kb downstream 1.0kb downstream 3550 true Chr5: 5229692-5233241 Arabidopsis thaliana
AT5G16020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5232242-5233241 Arabidopsis thaliana
AT5G16020 2.0kb upstream 2.0kb upstream 4550 true Chr5: 5227692-5232241 Arabidopsis thaliana
AT5G16020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5227692-5229691 Arabidopsis thaliana
AT5G16020 2.0kb downstream 2.0kb downstream 4550 true Chr5: 5229692-5234241 Arabidopsis thaliana
AT5G16020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5232242-5234241 Arabidopsis thaliana
AT5G16020 5.0kb upstream 5.0kb upstream 7550 true Chr5: 5224692-5232241 Arabidopsis thaliana
AT5G16020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5224692-5229691 Arabidopsis thaliana
AT5G16020 5.0kb downstream 5.0kb downstream 7550 true Chr5: 5229692-5237241 Arabidopsis thaliana
AT5G16020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5232242-5237241 Arabidopsis thaliana
AT5G16020 10.0kb upstream 10.0kb upstream 12550 true Chr5: 5219692-5232241 Arabidopsis thaliana
AT5G16020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5219692-5229691 Arabidopsis thaliana
AT5G16020 10.0kb downstream 10.0kb downstream 12550 true Chr5: 5229692-5242241 Arabidopsis thaliana
AT5G16020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5232242-5242241 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368321 5261 Brassicaceae View MSA
123832463 5264 Brassicales-Malvales View MSA
124321802 5266 SBM View MSA
124240474 5268 Malvidae View MSA
124050266 5270 Rosid View MSA
123747536 5271 Pentapetalae View MSA
122790741 5272 Eudicot View MSA
122042418 5273 Angiosperm View MSA
121309964 5274 Embryophyte View MSA
123347582 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain