Gene : AT5G16010 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10556//PTHR10556:SF35 - 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE // 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE FAMILY PROTEIN Genomic Order:  1501
Name:  ? AT5G16010 Secondary Identifier:  ? PAC:19672125
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16010 0.5kb upstream 0.5kb upstream 1693 true Chr5: 5227424-5229116 Arabidopsis thaliana
AT5G16010 0.5kb upstream 0.5kb upstream 500 false Chr5: 5227424-5227923 Arabidopsis thaliana
AT5G16010 0.5kb downstream 0.5kb downstream 1693 true Chr5: 5227924-5229616 Arabidopsis thaliana
AT5G16010 0.5kb downstream 0.5kb downstream 500 false Chr5: 5229117-5229616 Arabidopsis thaliana
AT5G16010 1.0kb upstream 1.0kb upstream 2193 true Chr5: 5226924-5229116 Arabidopsis thaliana
AT5G16010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5226924-5227923 Arabidopsis thaliana
AT5G16010 1.0kb downstream 1.0kb downstream 2193 true Chr5: 5227924-5230116 Arabidopsis thaliana
AT5G16010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5229117-5230116 Arabidopsis thaliana
AT5G16010 2.0kb upstream 2.0kb upstream 3193 true Chr5: 5225924-5229116 Arabidopsis thaliana
AT5G16010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5225924-5227923 Arabidopsis thaliana
AT5G16010 2.0kb downstream 2.0kb downstream 3193 true Chr5: 5227924-5231116 Arabidopsis thaliana
AT5G16010 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5229117-5231116 Arabidopsis thaliana
AT5G16010 5.0kb upstream 5.0kb upstream 6193 true Chr5: 5222924-5229116 Arabidopsis thaliana
AT5G16010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5222924-5227923 Arabidopsis thaliana
AT5G16010 5.0kb downstream 5.0kb downstream 6193 true Chr5: 5227924-5234116 Arabidopsis thaliana
AT5G16010 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5229117-5234116 Arabidopsis thaliana
AT5G16010 10.0kb upstream 10.0kb upstream 11193 true Chr5: 5217924-5229116 Arabidopsis thaliana
AT5G16010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5217924-5227923 Arabidopsis thaliana
AT5G16010 10.0kb downstream 10.0kb downstream 11193 true Chr5: 5227924-5239116 Arabidopsis thaliana
AT5G16010 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5229117-5239116 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376665 5261 Brassicaceae View MSA
123828704 5264 Brassicales-Malvales View MSA
124351206 5266 SBM View MSA
124246617 5268 Malvidae View MSA
124060747 5270 Rosid View MSA
123751267 5271 Pentapetalae View MSA
122793833 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.719     High  
cufflinks 7.597       Low
cufflinks 68.655     High  
cufflinks 10.223        
cufflinks 62.003     High  
cufflinks 8.348        

0 Strain