Gene : AT5G18970 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33294:SF3 - AWPM-19-LIKE PROTEIN Genomic Order:  1819
Name:  ? AT5G18970 Secondary Identifier:  ? PAC:19668515
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18970 0.5kb upstream 0.5kb upstream 1932 true Chr5: 6333211-6335142 Arabidopsis thaliana
AT5G18970 0.5kb upstream 0.5kb upstream 500 false Chr5: 6334643-6335142 Arabidopsis thaliana
AT5G18970 0.5kb downstream 0.5kb downstream 1932 true Chr5: 6332711-6334642 Arabidopsis thaliana
AT5G18970 0.5kb downstream 0.5kb downstream 500 false Chr5: 6332711-6333210 Arabidopsis thaliana
AT5G18970 1.0kb upstream 1.0kb upstream 2432 true Chr5: 6333211-6335642 Arabidopsis thaliana
AT5G18970 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6334643-6335642 Arabidopsis thaliana
AT5G18970 1.0kb downstream 1.0kb downstream 2432 true Chr5: 6332211-6334642 Arabidopsis thaliana
AT5G18970 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6332211-6333210 Arabidopsis thaliana
AT5G18970 2.0kb upstream 2.0kb upstream 3432 true Chr5: 6333211-6336642 Arabidopsis thaliana
AT5G18970 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6334643-6336642 Arabidopsis thaliana
AT5G18970 2.0kb downstream 2.0kb downstream 3432 true Chr5: 6331211-6334642 Arabidopsis thaliana
AT5G18970 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6331211-6333210 Arabidopsis thaliana
AT5G18970 5.0kb upstream 5.0kb upstream 6432 true Chr5: 6333211-6339642 Arabidopsis thaliana
AT5G18970 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6334643-6339642 Arabidopsis thaliana
AT5G18970 5.0kb downstream 5.0kb downstream 6432 true Chr5: 6328211-6334642 Arabidopsis thaliana
AT5G18970 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6328211-6333210 Arabidopsis thaliana
AT5G18970 10.0kb upstream 10.0kb upstream 11432 true Chr5: 6333211-6344642 Arabidopsis thaliana
AT5G18970 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6334643-6344642 Arabidopsis thaliana
AT5G18970 10.0kb downstream 10.0kb downstream 11432 true Chr5: 6323211-6334642 Arabidopsis thaliana
AT5G18970 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6323211-6333210 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368605 5261 Brassicaceae View MSA
123840314 5264 Brassicales-Malvales View MSA
124345567 5266 SBM View MSA
124238114 5268 Malvidae View MSA
124066796 5270 Rosid View MSA
123736510 5271 Pentapetalae View MSA
122792358 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.523        
cufflinks 30.69     High  
cufflinks 2.074        
cufflinks 25.795        
cufflinks 1.783       Low
cufflinks 28.11        

0 Strain