Gene : IPT5 A. thaliana TAIR10
Primary Identifier:  ? AT5G19040 Defline:  (1 of 2) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC
Genomic Order:  1827 Name:  ? AT5G19040
Secondary Identifier:  ? PAC:19667367
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2681 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19040 0.5kb upstream 0.5kb upstream 2077 true Chr5: 6361837-6363913 Arabidopsis thaliana
AT5G19040 0.5kb upstream 0.5kb upstream 500 false Chr5: 6363414-6363913 Arabidopsis thaliana
AT5G19040 0.5kb downstream 0.5kb downstream 2077 true Chr5: 6361337-6363413 Arabidopsis thaliana
AT5G19040 0.5kb downstream 0.5kb downstream 500 false Chr5: 6361337-6361836 Arabidopsis thaliana
AT5G19040 1.0kb upstream 1.0kb upstream 2577 true Chr5: 6361837-6364413 Arabidopsis thaliana
AT5G19040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6363414-6364413 Arabidopsis thaliana
AT5G19040 1.0kb downstream 1.0kb downstream 2577 true Chr5: 6360837-6363413 Arabidopsis thaliana
AT5G19040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6360837-6361836 Arabidopsis thaliana
AT5G19040 2.0kb upstream 2.0kb upstream 3577 true Chr5: 6361837-6365413 Arabidopsis thaliana
AT5G19040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6363414-6365413 Arabidopsis thaliana
AT5G19040 2.0kb downstream 2.0kb downstream 3577 true Chr5: 6359837-6363413 Arabidopsis thaliana
AT5G19040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6359837-6361836 Arabidopsis thaliana
AT5G19040 5.0kb upstream 5.0kb upstream 6577 true Chr5: 6361837-6368413 Arabidopsis thaliana
AT5G19040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6363414-6368413 Arabidopsis thaliana
AT5G19040 5.0kb downstream 5.0kb downstream 6577 true Chr5: 6356837-6363413 Arabidopsis thaliana
AT5G19040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6356837-6361836 Arabidopsis thaliana
AT5G19040 10.0kb upstream 10.0kb upstream 11577 true Chr5: 6361837-6373413 Arabidopsis thaliana
AT5G19040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6363414-6373413 Arabidopsis thaliana
AT5G19040 10.0kb downstream 10.0kb downstream 11577 true Chr5: 6351837-6363413 Arabidopsis thaliana
AT5G19040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6351837-6361836 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371498 5261 Brassicaceae View MSA
123829892 5264 Brassicales-Malvales View MSA
124338029 5266 SBM View MSA
124243543 5268 Malvidae View MSA
124067788 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.036     Low  
cufflinks 14.635        
cufflinks 0.027     Low  
cufflinks 10.494        
cufflinks 0.024     Low  
cufflinks 22.666       High

0 Strain