Gene : AT5G18710 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24078:SF307 - MOLECULAR CHAPERONE HSP40/DNAJ-LIKE PROTEIN Genomic Order:  1792
Name:  ? AT5G18710 Secondary Identifier:  ? PAC:19673020
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18710 0.5kb upstream 0.5kb upstream 2845 true Chr5: 6240634-6243478 Arabidopsis thaliana
AT5G18710 0.5kb upstream 0.5kb upstream 500 false Chr5: 6240634-6241133 Arabidopsis thaliana
AT5G18710 0.5kb downstream 0.5kb downstream 2845 true Chr5: 6241134-6243978 Arabidopsis thaliana
AT5G18710 0.5kb downstream 0.5kb downstream 500 false Chr5: 6243479-6243978 Arabidopsis thaliana
AT5G18710 1.0kb upstream 1.0kb upstream 3345 true Chr5: 6240134-6243478 Arabidopsis thaliana
AT5G18710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6240134-6241133 Arabidopsis thaliana
AT5G18710 1.0kb downstream 1.0kb downstream 3345 true Chr5: 6241134-6244478 Arabidopsis thaliana
AT5G18710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6243479-6244478 Arabidopsis thaliana
AT5G18710 2.0kb upstream 2.0kb upstream 4345 true Chr5: 6239134-6243478 Arabidopsis thaliana
AT5G18710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6239134-6241133 Arabidopsis thaliana
AT5G18710 2.0kb downstream 2.0kb downstream 4345 true Chr5: 6241134-6245478 Arabidopsis thaliana
AT5G18710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6243479-6245478 Arabidopsis thaliana
AT5G18710 5.0kb upstream 5.0kb upstream 7345 true Chr5: 6236134-6243478 Arabidopsis thaliana
AT5G18710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6236134-6241133 Arabidopsis thaliana
AT5G18710 5.0kb downstream 5.0kb downstream 7345 true Chr5: 6241134-6248478 Arabidopsis thaliana
AT5G18710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6243479-6248478 Arabidopsis thaliana
AT5G18710 10.0kb upstream 10.0kb upstream 12345 true Chr5: 6231134-6243478 Arabidopsis thaliana
AT5G18710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6231134-6241133 Arabidopsis thaliana
AT5G18710 10.0kb downstream 10.0kb downstream 12345 true Chr5: 6241134-6253478 Arabidopsis thaliana
AT5G18710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6243479-6253478 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331491 5261 Brassicaceae Singleton cluster - no MSA
123772675 5264 Brassicales-Malvales Singleton cluster - no MSA
124271183 5266 SBM Singleton cluster - no MSA
124252532 5268 Malvidae View MSA
124068520 5270 Rosid View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.134     Low  
cufflinks 0.479        
cufflinks 0.101     Low  
cufflinks 0.536       High
cufflinks 0.09     Low Low
cufflinks 0.392        

0 Strain