Gene : AT5G18740 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24078//PTHR24078:SF176 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1795
Name:  ? AT5G18740 Secondary Identifier:  ? PAC:19665360
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18740 0.5kb upstream 0.5kb upstream 2816 true Chr5: 6249227-6252042 Arabidopsis thaliana
AT5G18740 0.5kb upstream 0.5kb upstream 500 false Chr5: 6249227-6249726 Arabidopsis thaliana
AT5G18740 0.5kb downstream 0.5kb downstream 2816 true Chr5: 6249727-6252542 Arabidopsis thaliana
AT5G18740 0.5kb downstream 0.5kb downstream 500 false Chr5: 6252043-6252542 Arabidopsis thaliana
AT5G18740 1.0kb upstream 1.0kb upstream 3316 true Chr5: 6248727-6252042 Arabidopsis thaliana
AT5G18740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6248727-6249726 Arabidopsis thaliana
AT5G18740 1.0kb downstream 1.0kb downstream 3316 true Chr5: 6249727-6253042 Arabidopsis thaliana
AT5G18740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6252043-6253042 Arabidopsis thaliana
AT5G18740 2.0kb upstream 2.0kb upstream 4316 true Chr5: 6247727-6252042 Arabidopsis thaliana
AT5G18740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6247727-6249726 Arabidopsis thaliana
AT5G18740 2.0kb downstream 2.0kb downstream 4316 true Chr5: 6249727-6254042 Arabidopsis thaliana
AT5G18740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6252043-6254042 Arabidopsis thaliana
AT5G18740 5.0kb upstream 5.0kb upstream 7316 true Chr5: 6244727-6252042 Arabidopsis thaliana
AT5G18740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6244727-6249726 Arabidopsis thaliana
AT5G18740 5.0kb downstream 5.0kb downstream 7316 true Chr5: 6249727-6257042 Arabidopsis thaliana
AT5G18740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6252043-6257042 Arabidopsis thaliana
AT5G18740 10.0kb upstream 10.0kb upstream 12316 true Chr5: 6239727-6252042 Arabidopsis thaliana
AT5G18740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6239727-6249726 Arabidopsis thaliana
AT5G18740 10.0kb downstream 10.0kb downstream 12316 true Chr5: 6249727-6262042 Arabidopsis thaliana
AT5G18740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6252043-6262042 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330875 5261 Brassicaceae Singleton cluster - no MSA
123772095 5264 Brassicales-Malvales Singleton cluster - no MSA
124270616 5266 SBM Singleton cluster - no MSA
124248019 5268 Malvidae View MSA
124068520 5270 Rosid View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.143     Low  
cufflinks 0.262     Low  
cufflinks 0.048     Low Low
cufflinks 0.359     Low  
cufflinks 0.074     Low  
cufflinks 0.37        

0 Strain