Gene : AT5G18750 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24078//PTHR24078:SF224 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ DOMAIN-CONTAINING PROTEIN Genomic Order:  1797
Name:  ? AT5G18750 Secondary Identifier:  ? PAC:19669399
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18750 0.5kb upstream 0.5kb upstream 3813 true Chr5: 6254120-6257932 Arabidopsis thaliana
AT5G18750 0.5kb upstream 0.5kb upstream 500 false Chr5: 6254120-6254619 Arabidopsis thaliana
AT5G18750 0.5kb downstream 0.5kb downstream 3813 true Chr5: 6254620-6258432 Arabidopsis thaliana
AT5G18750 0.5kb downstream 0.5kb downstream 500 false Chr5: 6257933-6258432 Arabidopsis thaliana
AT5G18750 1.0kb upstream 1.0kb upstream 4313 true Chr5: 6253620-6257932 Arabidopsis thaliana
AT5G18750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6253620-6254619 Arabidopsis thaliana
AT5G18750 1.0kb downstream 1.0kb downstream 4313 true Chr5: 6254620-6258932 Arabidopsis thaliana
AT5G18750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6257933-6258932 Arabidopsis thaliana
AT5G18750 2.0kb upstream 2.0kb upstream 5313 true Chr5: 6252620-6257932 Arabidopsis thaliana
AT5G18750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6252620-6254619 Arabidopsis thaliana
AT5G18750 2.0kb downstream 2.0kb downstream 5313 true Chr5: 6254620-6259932 Arabidopsis thaliana
AT5G18750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6257933-6259932 Arabidopsis thaliana
AT5G18750 5.0kb upstream 5.0kb upstream 8313 true Chr5: 6249620-6257932 Arabidopsis thaliana
AT5G18750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6249620-6254619 Arabidopsis thaliana
AT5G18750 5.0kb downstream 5.0kb downstream 8313 true Chr5: 6254620-6262932 Arabidopsis thaliana
AT5G18750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6257933-6262932 Arabidopsis thaliana
AT5G18750 10.0kb upstream 10.0kb upstream 13313 true Chr5: 6244620-6257932 Arabidopsis thaliana
AT5G18750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6244620-6254619 Arabidopsis thaliana
AT5G18750 10.0kb downstream 10.0kb downstream 13313 true Chr5: 6254620-6267932 Arabidopsis thaliana
AT5G18750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6257933-6267932 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374019 5261 Brassicaceae View MSA
123835540 5264 Brassicales-Malvales View MSA
124347581 5266 SBM View MSA
124251082 5268 Malvidae View MSA
124073467 5270 Rosid View MSA
123743094 5271 Pentapetalae View MSA
122796940 5272 Eudicot View MSA
122050144 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.209       High
cufflinks 3.232        
cufflinks 2.279       Low
cufflinks 3.903        
cufflinks 2.809        
cufflinks 3.69        

0 Strain