Gene : AT5G18790 A. thaliana TAIR10
Defline:  (1 of 3) K02913 - large subunit ribosomal protein L33 (RP-L33, MRPL33, rpmG) Genomic Order:  1801
Name:  ? AT5G18790 Secondary Identifier:  ? PAC:19667637
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18790 0.5kb upstream 0.5kb upstream 1316 true Chr5: 6266092-6267407 Arabidopsis thaliana
AT5G18790 0.5kb upstream 0.5kb upstream 500 false Chr5: 6266908-6267407 Arabidopsis thaliana
AT5G18790 0.5kb downstream 0.5kb downstream 1316 true Chr5: 6265592-6266907 Arabidopsis thaliana
AT5G18790 0.5kb downstream 0.5kb downstream 500 false Chr5: 6265592-6266091 Arabidopsis thaliana
AT5G18790 1.0kb upstream 1.0kb upstream 1816 true Chr5: 6266092-6267907 Arabidopsis thaliana
AT5G18790 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6266908-6267907 Arabidopsis thaliana
AT5G18790 1.0kb downstream 1.0kb downstream 1816 true Chr5: 6265092-6266907 Arabidopsis thaliana
AT5G18790 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6265092-6266091 Arabidopsis thaliana
AT5G18790 2.0kb upstream 2.0kb upstream 2816 true Chr5: 6266092-6268907 Arabidopsis thaliana
AT5G18790 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6266908-6268907 Arabidopsis thaliana
AT5G18790 2.0kb downstream 2.0kb downstream 2816 true Chr5: 6264092-6266907 Arabidopsis thaliana
AT5G18790 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6264092-6266091 Arabidopsis thaliana
AT5G18790 5.0kb upstream 5.0kb upstream 5816 true Chr5: 6266092-6271907 Arabidopsis thaliana
AT5G18790 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6266908-6271907 Arabidopsis thaliana
AT5G18790 5.0kb downstream 5.0kb downstream 5816 true Chr5: 6261092-6266907 Arabidopsis thaliana
AT5G18790 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6261092-6266091 Arabidopsis thaliana
AT5G18790 10.0kb upstream 10.0kb upstream 10816 true Chr5: 6266092-6276907 Arabidopsis thaliana
AT5G18790 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6266908-6276907 Arabidopsis thaliana
AT5G18790 10.0kb downstream 10.0kb downstream 10816 true Chr5: 6256092-6266907 Arabidopsis thaliana
AT5G18790 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6256092-6266091 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026232 5273 Angiosperm View MSA
122378212 5261 Brassicaceae View MSA
123837339 5264 Brassicales-Malvales View MSA
124322288 5266 SBM View MSA
124242301 5268 Malvidae View MSA
124037177 5270 Rosid View MSA
123743240 5271 Pentapetalae View MSA
122789761 5272 Eudicot View MSA
121345561 5274 Embryophyte View MSA
123425406 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.233        
cufflinks 11.009        
cufflinks 5.959        
cufflinks 11.967        
cufflinks 5.236       Low
cufflinks 11.928        

0 Strain