Gene : AT5G18770 A. thaliana TAIR10
Defline:  (1 of 68) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  1799
Name:  ? AT5G18770 Secondary Identifier:  ? PAC:19671172
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18770 0.5kb upstream 0.5kb upstream 2585 true Chr5: 6260852-6263436 Arabidopsis thaliana
AT5G18770 0.5kb upstream 0.5kb upstream 500 false Chr5: 6260852-6261351 Arabidopsis thaliana
AT5G18770 0.5kb downstream 0.5kb downstream 2585 true Chr5: 6261352-6263936 Arabidopsis thaliana
AT5G18770 0.5kb downstream 0.5kb downstream 500 false Chr5: 6263437-6263936 Arabidopsis thaliana
AT5G18770 1.0kb upstream 1.0kb upstream 3085 true Chr5: 6260352-6263436 Arabidopsis thaliana
AT5G18770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6260352-6261351 Arabidopsis thaliana
AT5G18770 1.0kb downstream 1.0kb downstream 3085 true Chr5: 6261352-6264436 Arabidopsis thaliana
AT5G18770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6263437-6264436 Arabidopsis thaliana
AT5G18770 2.0kb upstream 2.0kb upstream 4085 true Chr5: 6259352-6263436 Arabidopsis thaliana
AT5G18770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6259352-6261351 Arabidopsis thaliana
AT5G18770 2.0kb downstream 2.0kb downstream 4085 true Chr5: 6261352-6265436 Arabidopsis thaliana
AT5G18770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6263437-6265436 Arabidopsis thaliana
AT5G18770 5.0kb upstream 5.0kb upstream 7085 true Chr5: 6256352-6263436 Arabidopsis thaliana
AT5G18770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6256352-6261351 Arabidopsis thaliana
AT5G18770 5.0kb downstream 5.0kb downstream 7085 true Chr5: 6261352-6268436 Arabidopsis thaliana
AT5G18770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6263437-6268436 Arabidopsis thaliana
AT5G18770 10.0kb upstream 10.0kb upstream 12085 true Chr5: 6251352-6263436 Arabidopsis thaliana
AT5G18770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6251352-6261351 Arabidopsis thaliana
AT5G18770 10.0kb downstream 10.0kb downstream 12085 true Chr5: 6261352-6273436 Arabidopsis thaliana
AT5G18770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6263437-6273436 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379975 5261 Brassicaceae View MSA
123802503 5264 Brassicales-Malvales View MSA
124299693 5266 SBM View MSA
124151032 5268 Malvidae View MSA
123876550 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.032        
cufflinks 6.862       High
cufflinks 2.283       Low
cufflinks 6.733       High
cufflinks 2.342       Low
cufflinks 5.338        

0 Strain