Gene : AT5G18600 A. thaliana TAIR10
Defline:  (1 of 6) PTHR10168//PTHR10168:SF115 - GLUTAREDOXIN // MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  1779
Name:  ? AT5G18600 Secondary Identifier:  ? PAC:19668147
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18600 0.5kb upstream 0.5kb upstream 1197 true Chr5: 6183258-6184454 Arabidopsis thaliana
AT5G18600 0.5kb upstream 0.5kb upstream 500 false Chr5: 6183955-6184454 Arabidopsis thaliana
AT5G18600 0.5kb downstream 0.5kb downstream 1197 true Chr5: 6182758-6183954 Arabidopsis thaliana
AT5G18600 0.5kb downstream 0.5kb downstream 500 false Chr5: 6182758-6183257 Arabidopsis thaliana
AT5G18600 1.0kb upstream 1.0kb upstream 1697 true Chr5: 6183258-6184954 Arabidopsis thaliana
AT5G18600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6183955-6184954 Arabidopsis thaliana
AT5G18600 1.0kb downstream 1.0kb downstream 1697 true Chr5: 6182258-6183954 Arabidopsis thaliana
AT5G18600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6182258-6183257 Arabidopsis thaliana
AT5G18600 2.0kb upstream 2.0kb upstream 2697 true Chr5: 6183258-6185954 Arabidopsis thaliana
AT5G18600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6183955-6185954 Arabidopsis thaliana
AT5G18600 2.0kb downstream 2.0kb downstream 2697 true Chr5: 6181258-6183954 Arabidopsis thaliana
AT5G18600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6181258-6183257 Arabidopsis thaliana
AT5G18600 5.0kb upstream 5.0kb upstream 5697 true Chr5: 6183258-6188954 Arabidopsis thaliana
AT5G18600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6183955-6188954 Arabidopsis thaliana
AT5G18600 5.0kb downstream 5.0kb downstream 5697 true Chr5: 6178258-6183954 Arabidopsis thaliana
AT5G18600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6178258-6183257 Arabidopsis thaliana
AT5G18600 10.0kb upstream 10.0kb upstream 10697 true Chr5: 6183258-6193954 Arabidopsis thaliana
AT5G18600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6183955-6193954 Arabidopsis thaliana
AT5G18600 10.0kb downstream 10.0kb downstream 10697 true Chr5: 6173258-6183954 Arabidopsis thaliana
AT5G18600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6173258-6183257 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378007 5261 Brassicaceae View MSA
123836596 5264 Brassicales-Malvales View MSA
124340857 5266 SBM View MSA
124253911 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.095     High  
cufflinks 0.651        
cufflinks 83.383     High  
cufflinks 0.285     Low  
cufflinks 55.286     High  
cufflinks 0.111     Low Low

0 Strain