Gene : AT5G18460 A. thaliana TAIR10
Defline:  (1 of 40) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  1764
Name:  ? AT5G18460 Secondary Identifier:  ? PAC:19671989
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18460 0.5kb upstream 0.5kb upstream 4355 true Chr5: 6122367-6126721 Arabidopsis thaliana
AT5G18460 0.5kb upstream 0.5kb upstream 500 false Chr5: 6122367-6122866 Arabidopsis thaliana
AT5G18460 0.5kb downstream 0.5kb downstream 4355 true Chr5: 6122867-6127221 Arabidopsis thaliana
AT5G18460 0.5kb downstream 0.5kb downstream 500 false Chr5: 6126722-6127221 Arabidopsis thaliana
AT5G18460 1.0kb upstream 1.0kb upstream 4855 true Chr5: 6121867-6126721 Arabidopsis thaliana
AT5G18460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6121867-6122866 Arabidopsis thaliana
AT5G18460 1.0kb downstream 1.0kb downstream 4855 true Chr5: 6122867-6127721 Arabidopsis thaliana
AT5G18460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6126722-6127721 Arabidopsis thaliana
AT5G18460 2.0kb upstream 2.0kb upstream 5855 true Chr5: 6120867-6126721 Arabidopsis thaliana
AT5G18460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6120867-6122866 Arabidopsis thaliana
AT5G18460 2.0kb downstream 2.0kb downstream 5855 true Chr5: 6122867-6128721 Arabidopsis thaliana
AT5G18460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6126722-6128721 Arabidopsis thaliana
AT5G18460 5.0kb upstream 5.0kb upstream 8855 true Chr5: 6117867-6126721 Arabidopsis thaliana
AT5G18460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6117867-6122866 Arabidopsis thaliana
AT5G18460 5.0kb downstream 5.0kb downstream 8855 true Chr5: 6122867-6131721 Arabidopsis thaliana
AT5G18460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6126722-6131721 Arabidopsis thaliana
AT5G18460 10.0kb upstream 10.0kb upstream 13855 true Chr5: 6112867-6126721 Arabidopsis thaliana
AT5G18460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6112867-6122866 Arabidopsis thaliana
AT5G18460 10.0kb downstream 10.0kb downstream 13855 true Chr5: 6122867-6136721 Arabidopsis thaliana
AT5G18460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6126722-6136721 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369003 5261 Brassicaceae View MSA
123835325 5264 Brassicales-Malvales View MSA
124344235 5266 SBM View MSA
124244653 5268 Malvidae View MSA
124062143 5270 Rosid View MSA
123739520 5271 Pentapetalae View MSA
122793543 5272 Eudicot View MSA
122048066 5273 Angiosperm View MSA
121349991 5274 Embryophyte View MSA
123381532 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.712       High
cufflinks 1.509       Low
cufflinks 4.757        
cufflinks 2.516        
cufflinks 3.284        
cufflinks 2.782        

0 Strain