Gene : AT5G18400 A. thaliana TAIR10
Defline:  (1 of 1) PF05093 - Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (CIAPIN1) Genomic Order:  1755
Name:  ? AT5G18400 Secondary Identifier:  ? PAC:19666954
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18400 0.5kb upstream 0.5kb upstream 2872 true Chr5: 6092682-6095553 Arabidopsis thaliana
AT5G18400 0.5kb upstream 0.5kb upstream 500 false Chr5: 6095054-6095553 Arabidopsis thaliana
AT5G18400 0.5kb downstream 0.5kb downstream 2872 true Chr5: 6092182-6095053 Arabidopsis thaliana
AT5G18400 0.5kb downstream 0.5kb downstream 500 false Chr5: 6092182-6092681 Arabidopsis thaliana
AT5G18400 1.0kb upstream 1.0kb upstream 3372 true Chr5: 6092682-6096053 Arabidopsis thaliana
AT5G18400 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6095054-6096053 Arabidopsis thaliana
AT5G18400 1.0kb downstream 1.0kb downstream 3372 true Chr5: 6091682-6095053 Arabidopsis thaliana
AT5G18400 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6091682-6092681 Arabidopsis thaliana
AT5G18400 2.0kb upstream 2.0kb upstream 4372 true Chr5: 6092682-6097053 Arabidopsis thaliana
AT5G18400 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6095054-6097053 Arabidopsis thaliana
AT5G18400 2.0kb downstream 2.0kb downstream 4372 true Chr5: 6090682-6095053 Arabidopsis thaliana
AT5G18400 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6090682-6092681 Arabidopsis thaliana
AT5G18400 5.0kb upstream 5.0kb upstream 7372 true Chr5: 6092682-6100053 Arabidopsis thaliana
AT5G18400 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6095054-6100053 Arabidopsis thaliana
AT5G18400 5.0kb downstream 5.0kb downstream 7372 true Chr5: 6087682-6095053 Arabidopsis thaliana
AT5G18400 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6087682-6092681 Arabidopsis thaliana
AT5G18400 10.0kb upstream 10.0kb upstream 12372 true Chr5: 6092682-6105053 Arabidopsis thaliana
AT5G18400 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6095054-6105053 Arabidopsis thaliana
AT5G18400 10.0kb downstream 10.0kb downstream 12372 true Chr5: 6082682-6095053 Arabidopsis thaliana
AT5G18400 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6082682-6092681 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367716 5261 Brassicaceae View MSA
123831522 5264 Brassicales-Malvales View MSA
124341948 5266 SBM View MSA
124240685 5268 Malvidae View MSA
124060414 5270 Rosid View MSA
123741055 5271 Pentapetalae View MSA
122788578 5272 Eudicot View MSA
122047099 5273 Angiosperm View MSA
121344266 5274 Embryophyte View MSA
123424470 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.074        
cufflinks 10.773        
cufflinks 4.515       Low
cufflinks 8.759        
cufflinks 4.0       Low
cufflinks 10.799        

0 Strain