Gene : NCBP A. thaliana TAIR10
Primary Identifier:  ? AT5G18110 Defline:  (1 of 1) PTHR11960:SF18 - 4EHP, ISOFORM B
Genomic Order:  1725 Name:  ? AT5G18110
Secondary Identifier:  ? PAC:19667959
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18110 0.5kb upstream 0.5kb upstream 2438 true Chr5: 5988744-5991181 Arabidopsis thaliana
AT5G18110 0.5kb upstream 0.5kb upstream 500 false Chr5: 5990682-5991181 Arabidopsis thaliana
AT5G18110 0.5kb downstream 0.5kb downstream 2438 true Chr5: 5988244-5990681 Arabidopsis thaliana
AT5G18110 0.5kb downstream 0.5kb downstream 500 false Chr5: 5988244-5988743 Arabidopsis thaliana
AT5G18110 1.0kb upstream 1.0kb upstream 2938 true Chr5: 5988744-5991681 Arabidopsis thaliana
AT5G18110 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5990682-5991681 Arabidopsis thaliana
AT5G18110 1.0kb downstream 1.0kb downstream 2938 true Chr5: 5987744-5990681 Arabidopsis thaliana
AT5G18110 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5987744-5988743 Arabidopsis thaliana
AT5G18110 2.0kb upstream 2.0kb upstream 3938 true Chr5: 5988744-5992681 Arabidopsis thaliana
AT5G18110 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5990682-5992681 Arabidopsis thaliana
AT5G18110 2.0kb downstream 2.0kb downstream 3938 true Chr5: 5986744-5990681 Arabidopsis thaliana
AT5G18110 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5986744-5988743 Arabidopsis thaliana
AT5G18110 5.0kb upstream 5.0kb upstream 6938 true Chr5: 5988744-5995681 Arabidopsis thaliana
AT5G18110 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5990682-5995681 Arabidopsis thaliana
AT5G18110 5.0kb downstream 5.0kb downstream 6938 true Chr5: 5983744-5990681 Arabidopsis thaliana
AT5G18110 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5983744-5988743 Arabidopsis thaliana
AT5G18110 10.0kb upstream 10.0kb upstream 11938 true Chr5: 5988744-6000681 Arabidopsis thaliana
AT5G18110 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5990682-6000681 Arabidopsis thaliana
AT5G18110 10.0kb downstream 10.0kb downstream 11938 true Chr5: 5978744-5990681 Arabidopsis thaliana
AT5G18110 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5978744-5988743 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375898 5261 Brassicaceae View MSA
123835196 5264 Brassicales-Malvales View MSA
124336515 5266 SBM View MSA
124239926 5268 Malvidae View MSA
124061586 5270 Rosid View MSA
123751569 5271 Pentapetalae View MSA
122785682 5272 Eudicot View MSA
122047051 5273 Angiosperm View MSA
121344049 5274 Embryophyte View MSA
123379965 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.8     High  
cufflinks 43.636     High  
cufflinks 27.456     High Low
cufflinks 46.141     High High
cufflinks 31.952     High  
cufflinks 37.164     High  

0 Strain