Gene : AT5G18130 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33646:SF2 - F20H23.8 PROTEIN-RELATED Genomic Order:  1727
Name:  ? AT5G18130 Secondary Identifier:  ? PAC:19665999
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18130 0.5kb upstream 0.5kb upstream 2520 true Chr5: 5994979-5997498 Arabidopsis thaliana
AT5G18130 0.5kb upstream 0.5kb upstream 500 false Chr5: 5994979-5995478 Arabidopsis thaliana
AT5G18130 0.5kb downstream 0.5kb downstream 2520 true Chr5: 5995479-5997998 Arabidopsis thaliana
AT5G18130 0.5kb downstream 0.5kb downstream 500 false Chr5: 5997499-5997998 Arabidopsis thaliana
AT5G18130 1.0kb upstream 1.0kb upstream 3020 true Chr5: 5994479-5997498 Arabidopsis thaliana
AT5G18130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5994479-5995478 Arabidopsis thaliana
AT5G18130 1.0kb downstream 1.0kb downstream 3020 true Chr5: 5995479-5998498 Arabidopsis thaliana
AT5G18130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5997499-5998498 Arabidopsis thaliana
AT5G18130 2.0kb upstream 2.0kb upstream 4020 true Chr5: 5993479-5997498 Arabidopsis thaliana
AT5G18130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5993479-5995478 Arabidopsis thaliana
AT5G18130 2.0kb downstream 2.0kb downstream 4020 true Chr5: 5995479-5999498 Arabidopsis thaliana
AT5G18130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5997499-5999498 Arabidopsis thaliana
AT5G18130 5.0kb upstream 5.0kb upstream 7020 true Chr5: 5990479-5997498 Arabidopsis thaliana
AT5G18130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5990479-5995478 Arabidopsis thaliana
AT5G18130 5.0kb downstream 5.0kb downstream 7020 true Chr5: 5995479-6002498 Arabidopsis thaliana
AT5G18130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5997499-6002498 Arabidopsis thaliana
AT5G18130 10.0kb upstream 10.0kb upstream 12020 true Chr5: 5985479-5997498 Arabidopsis thaliana
AT5G18130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5985479-5995478 Arabidopsis thaliana
AT5G18130 10.0kb downstream 10.0kb downstream 12020 true Chr5: 5995479-6007498 Arabidopsis thaliana
AT5G18130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5997499-6007498 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363762 5261 Brassicaceae View MSA
123837615 5264 Brassicales-Malvales View MSA
124339499 5266 SBM View MSA
124251286 5268 Malvidae View MSA
124064474 5270 Rosid View MSA
123748778 5271 Pentapetalae View MSA
122792798 5272 Eudicot View MSA
122044291 5273 Angiosperm View MSA
121310268 5274 Embryophyte View MSA
123347804 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.768        
cufflinks 12.761        
cufflinks 35.369     High  
cufflinks 20.913        
cufflinks 67.885     High High
cufflinks 11.277       Low

0 Strain