Gene : AT5G18040 A. thaliana TAIR10
Genomic Order:  1717 Name:  ? AT5G18040
Secondary Identifier:  ? PAC:19668698
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18040 0.5kb upstream 0.5kb upstream 2238 true Chr5: 5971919-5974156 Arabidopsis thaliana
AT5G18040 0.5kb upstream 0.5kb upstream 500 false Chr5: 5971919-5972418 Arabidopsis thaliana
AT5G18040 0.5kb downstream 0.5kb downstream 2238 true Chr5: 5972419-5974656 Arabidopsis thaliana
AT5G18040 0.5kb downstream 0.5kb downstream 500 false Chr5: 5974157-5974656 Arabidopsis thaliana
AT5G18040 1.0kb upstream 1.0kb upstream 2738 true Chr5: 5971419-5974156 Arabidopsis thaliana
AT5G18040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5971419-5972418 Arabidopsis thaliana
AT5G18040 1.0kb downstream 1.0kb downstream 2738 true Chr5: 5972419-5975156 Arabidopsis thaliana
AT5G18040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5974157-5975156 Arabidopsis thaliana
AT5G18040 2.0kb upstream 2.0kb upstream 3738 true Chr5: 5970419-5974156 Arabidopsis thaliana
AT5G18040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5970419-5972418 Arabidopsis thaliana
AT5G18040 2.0kb downstream 2.0kb downstream 3738 true Chr5: 5972419-5976156 Arabidopsis thaliana
AT5G18040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5974157-5976156 Arabidopsis thaliana
AT5G18040 5.0kb upstream 5.0kb upstream 6738 true Chr5: 5967419-5974156 Arabidopsis thaliana
AT5G18040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5967419-5972418 Arabidopsis thaliana
AT5G18040 5.0kb downstream 5.0kb downstream 6738 true Chr5: 5972419-5979156 Arabidopsis thaliana
AT5G18040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5974157-5979156 Arabidopsis thaliana
AT5G18040 10.0kb upstream 10.0kb upstream 11738 true Chr5: 5962419-5974156 Arabidopsis thaliana
AT5G18040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5962419-5972418 Arabidopsis thaliana
AT5G18040 10.0kb downstream 10.0kb downstream 11738 true Chr5: 5972419-5984156 Arabidopsis thaliana
AT5G18040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5974157-5984156 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512180 5273 Angiosperm View MSA
122380753 5261 Brassicaceae View MSA
123802883 5264 Brassicales-Malvales View MSA
124300044 5266 SBM View MSA
124151318 5268 Malvidae View MSA
123876780 5270 Rosid View MSA
123460405 5271 Pentapetalae View MSA
122495779 5272 Eudicot View MSA
120785206 5274 Embryophyte View MSA
122827077 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.397        
cufflinks 11.327        
cufflinks 4.738       Low
cufflinks 12.276        
cufflinks 5.232        
cufflinks 11.527        

0 Strain