Gene : AT5G18090 A. thaliana TAIR10
Defline:  (1 of 7) PTHR31920//PTHR31920:SF20 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING PROTEIN REM23 Genomic Order:  1723
Name:  ? AT5G18090 Secondary Identifier:  ? PAC:19665484
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18090 0.5kb upstream 0.5kb upstream 2301 true Chr5: 5984865-5987165 Arabidopsis thaliana
AT5G18090 0.5kb upstream 0.5kb upstream 500 false Chr5: 5984865-5985364 Arabidopsis thaliana
AT5G18090 0.5kb downstream 0.5kb downstream 2301 true Chr5: 5985365-5987665 Arabidopsis thaliana
AT5G18090 0.5kb downstream 0.5kb downstream 500 false Chr5: 5987166-5987665 Arabidopsis thaliana
AT5G18090 1.0kb upstream 1.0kb upstream 2801 true Chr5: 5984365-5987165 Arabidopsis thaliana
AT5G18090 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5984365-5985364 Arabidopsis thaliana
AT5G18090 1.0kb downstream 1.0kb downstream 2801 true Chr5: 5985365-5988165 Arabidopsis thaliana
AT5G18090 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5987166-5988165 Arabidopsis thaliana
AT5G18090 2.0kb upstream 2.0kb upstream 3801 true Chr5: 5983365-5987165 Arabidopsis thaliana
AT5G18090 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5983365-5985364 Arabidopsis thaliana
AT5G18090 2.0kb downstream 2.0kb downstream 3801 true Chr5: 5985365-5989165 Arabidopsis thaliana
AT5G18090 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5987166-5989165 Arabidopsis thaliana
AT5G18090 5.0kb upstream 5.0kb upstream 6801 true Chr5: 5980365-5987165 Arabidopsis thaliana
AT5G18090 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5980365-5985364 Arabidopsis thaliana
AT5G18090 5.0kb downstream 5.0kb downstream 6801 true Chr5: 5985365-5992165 Arabidopsis thaliana
AT5G18090 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5987166-5992165 Arabidopsis thaliana
AT5G18090 10.0kb upstream 10.0kb upstream 11801 true Chr5: 5975365-5987165 Arabidopsis thaliana
AT5G18090 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5975365-5985364 Arabidopsis thaliana
AT5G18090 10.0kb downstream 10.0kb downstream 11801 true Chr5: 5985365-5997165 Arabidopsis thaliana
AT5G18090 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5987166-5997165 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379207 5261 Brassicaceae View MSA
123841668 5264 Brassicales-Malvales View MSA
124350666 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.058     Low  
cufflinks 0.193     Low  
cufflinks 0.046     Low  
cufflinks 0.228     Low High
cufflinks 0.043     Low Low
cufflinks 0.2     Low  

0 Strain