Gene : AT5G17910 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33870:SF4 - GB Genomic Order:  1704
Name:  ? AT5G17910 Secondary Identifier:  ? PAC:19670573
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17910 0.5kb upstream 0.5kb upstream 5914 true Chr5: 5926862-5932775 Arabidopsis thaliana
AT5G17910 0.5kb upstream 0.5kb upstream 500 false Chr5: 5926862-5927361 Arabidopsis thaliana
AT5G17910 0.5kb downstream 0.5kb downstream 5914 true Chr5: 5927362-5933275 Arabidopsis thaliana
AT5G17910 0.5kb downstream 0.5kb downstream 500 false Chr5: 5932776-5933275 Arabidopsis thaliana
AT5G17910 1.0kb upstream 1.0kb upstream 6414 true Chr5: 5926362-5932775 Arabidopsis thaliana
AT5G17910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5926362-5927361 Arabidopsis thaliana
AT5G17910 1.0kb downstream 1.0kb downstream 6414 true Chr5: 5927362-5933775 Arabidopsis thaliana
AT5G17910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5932776-5933775 Arabidopsis thaliana
AT5G17910 2.0kb upstream 2.0kb upstream 7414 true Chr5: 5925362-5932775 Arabidopsis thaliana
AT5G17910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5925362-5927361 Arabidopsis thaliana
AT5G17910 2.0kb downstream 2.0kb downstream 7414 true Chr5: 5927362-5934775 Arabidopsis thaliana
AT5G17910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5932776-5934775 Arabidopsis thaliana
AT5G17910 5.0kb upstream 5.0kb upstream 10414 true Chr5: 5922362-5932775 Arabidopsis thaliana
AT5G17910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5922362-5927361 Arabidopsis thaliana
AT5G17910 5.0kb downstream 5.0kb downstream 10414 true Chr5: 5927362-5937775 Arabidopsis thaliana
AT5G17910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5932776-5937775 Arabidopsis thaliana
AT5G17910 10.0kb upstream 10.0kb upstream 15414 true Chr5: 5917362-5932775 Arabidopsis thaliana
AT5G17910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5917362-5927361 Arabidopsis thaliana
AT5G17910 10.0kb downstream 10.0kb downstream 15414 true Chr5: 5927362-5942775 Arabidopsis thaliana
AT5G17910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5932776-5942775 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378677 5261 Brassicaceae View MSA
123835852 5264 Brassicales-Malvales View MSA
124345639 5266 SBM View MSA
124253819 5268 Malvidae View MSA
124069776 5270 Rosid View MSA
123749808 5271 Pentapetalae View MSA
122794313 5272 Eudicot View MSA
122043961 5273 Angiosperm View MSA
121310217 5274 Embryophyte View MSA
123347767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.403        
cufflinks 9.302        
cufflinks 4.124       Low
cufflinks 9.85        
cufflinks 4.888        
cufflinks 11.969       High

0 Strain