Gene : AT5G17900 A. thaliana TAIR10
Defline:  (1 of 2) K13110 - microfibrillar-associated protein 1 (MFAP1) Genomic Order:  1703
Name:  ? AT5G17900 Secondary Identifier:  ? PAC:19666296
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17900 0.5kb upstream 0.5kb upstream 2695 true Chr5: 5924207-5926901 Arabidopsis thaliana
AT5G17900 0.5kb upstream 0.5kb upstream 500 false Chr5: 5924207-5924706 Arabidopsis thaliana
AT5G17900 0.5kb downstream 0.5kb downstream 2695 true Chr5: 5924707-5927401 Arabidopsis thaliana
AT5G17900 0.5kb downstream 0.5kb downstream 500 false Chr5: 5926902-5927401 Arabidopsis thaliana
AT5G17900 1.0kb upstream 1.0kb upstream 3195 true Chr5: 5923707-5926901 Arabidopsis thaliana
AT5G17900 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5923707-5924706 Arabidopsis thaliana
AT5G17900 1.0kb downstream 1.0kb downstream 3195 true Chr5: 5924707-5927901 Arabidopsis thaliana
AT5G17900 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5926902-5927901 Arabidopsis thaliana
AT5G17900 2.0kb upstream 2.0kb upstream 4195 true Chr5: 5922707-5926901 Arabidopsis thaliana
AT5G17900 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5922707-5924706 Arabidopsis thaliana
AT5G17900 2.0kb downstream 2.0kb downstream 4195 true Chr5: 5924707-5928901 Arabidopsis thaliana
AT5G17900 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5926902-5928901 Arabidopsis thaliana
AT5G17900 5.0kb upstream 5.0kb upstream 7195 true Chr5: 5919707-5926901 Arabidopsis thaliana
AT5G17900 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5919707-5924706 Arabidopsis thaliana
AT5G17900 5.0kb downstream 5.0kb downstream 7195 true Chr5: 5924707-5931901 Arabidopsis thaliana
AT5G17900 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5926902-5931901 Arabidopsis thaliana
AT5G17900 10.0kb upstream 10.0kb upstream 12195 true Chr5: 5914707-5926901 Arabidopsis thaliana
AT5G17900 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5914707-5924706 Arabidopsis thaliana
AT5G17900 10.0kb downstream 10.0kb downstream 12195 true Chr5: 5924707-5936901 Arabidopsis thaliana
AT5G17900 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5926902-5936901 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365809 5261 Brassicaceae View MSA
123837589 5264 Brassicales-Malvales View MSA
124337221 5266 SBM View MSA
124237391 5268 Malvidae View MSA
124067088 5270 Rosid View MSA
123736689 5271 Pentapetalae View MSA
122786244 5272 Eudicot View MSA
122047677 5273 Angiosperm View MSA
121344140 5274 Embryophyte View MSA
123423815 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.244        
cufflinks 22.469        
cufflinks 15.028       Low
cufflinks 24.98       High
cufflinks 16.584        
cufflinks 21.118        

0 Strain