Gene : EMB1241 A. thaliana TAIR10
Primary Identifier:  ? AT5G17710 Defline:  (1 of 1) PTHR21237//PTHR21237:SF27 - GRPE PROTEIN // GRPE PROTEIN HOMOLOG
Genomic Order:  1682 Name:  ? AT5G17710
Secondary Identifier:  ? PAC:19666216
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17710 0.5kb upstream 0.5kb upstream 2886 true Chr5: 5839343-5842228 Arabidopsis thaliana
AT5G17710 0.5kb upstream 0.5kb upstream 500 false Chr5: 5841729-5842228 Arabidopsis thaliana
AT5G17710 0.5kb downstream 0.5kb downstream 2886 true Chr5: 5838843-5841728 Arabidopsis thaliana
AT5G17710 0.5kb downstream 0.5kb downstream 500 false Chr5: 5838843-5839342 Arabidopsis thaliana
AT5G17710 1.0kb upstream 1.0kb upstream 3386 true Chr5: 5839343-5842728 Arabidopsis thaliana
AT5G17710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5841729-5842728 Arabidopsis thaliana
AT5G17710 1.0kb downstream 1.0kb downstream 3386 true Chr5: 5838343-5841728 Arabidopsis thaliana
AT5G17710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5838343-5839342 Arabidopsis thaliana
AT5G17710 2.0kb upstream 2.0kb upstream 4386 true Chr5: 5839343-5843728 Arabidopsis thaliana
AT5G17710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5841729-5843728 Arabidopsis thaliana
AT5G17710 2.0kb downstream 2.0kb downstream 4386 true Chr5: 5837343-5841728 Arabidopsis thaliana
AT5G17710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5837343-5839342 Arabidopsis thaliana
AT5G17710 5.0kb upstream 5.0kb upstream 7386 true Chr5: 5839343-5846728 Arabidopsis thaliana
AT5G17710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5841729-5846728 Arabidopsis thaliana
AT5G17710 5.0kb downstream 5.0kb downstream 7386 true Chr5: 5834343-5841728 Arabidopsis thaliana
AT5G17710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5834343-5839342 Arabidopsis thaliana
AT5G17710 10.0kb upstream 10.0kb upstream 12386 true Chr5: 5839343-5851728 Arabidopsis thaliana
AT5G17710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5841729-5851728 Arabidopsis thaliana
AT5G17710 10.0kb downstream 10.0kb downstream 12386 true Chr5: 5829343-5841728 Arabidopsis thaliana
AT5G17710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5829343-5839342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366160 5261 Brassicaceae View MSA
123835511 5264 Brassicales-Malvales View MSA
124350099 5266 SBM View MSA
124247920 5268 Malvidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.354       High
cufflinks 8.041        
cufflinks 27.445     High High
cufflinks 7.711        
cufflinks 20.81        
cufflinks 7.427        

0 Strain