Gene : AT5G17720 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10992:SF217 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  1683
Name:  ? AT5G17720 Secondary Identifier:  ? PAC:19669004
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPAS-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17720 0.5kb upstream 0.5kb upstream 2220 true Chr5: 5845434-5847653 Arabidopsis thaliana
AT5G17720 0.5kb upstream 0.5kb upstream 500 false Chr5: 5845434-5845933 Arabidopsis thaliana
AT5G17720 0.5kb downstream 0.5kb downstream 2220 true Chr5: 5845934-5848153 Arabidopsis thaliana
AT5G17720 0.5kb downstream 0.5kb downstream 500 false Chr5: 5847654-5848153 Arabidopsis thaliana
AT5G17720 1.0kb upstream 1.0kb upstream 2720 true Chr5: 5844934-5847653 Arabidopsis thaliana
AT5G17720 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5844934-5845933 Arabidopsis thaliana
AT5G17720 1.0kb downstream 1.0kb downstream 2720 true Chr5: 5845934-5848653 Arabidopsis thaliana
AT5G17720 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5847654-5848653 Arabidopsis thaliana
AT5G17720 2.0kb upstream 2.0kb upstream 3720 true Chr5: 5843934-5847653 Arabidopsis thaliana
AT5G17720 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5843934-5845933 Arabidopsis thaliana
AT5G17720 2.0kb downstream 2.0kb downstream 3720 true Chr5: 5845934-5849653 Arabidopsis thaliana
AT5G17720 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5847654-5849653 Arabidopsis thaliana
AT5G17720 5.0kb upstream 5.0kb upstream 6720 true Chr5: 5840934-5847653 Arabidopsis thaliana
AT5G17720 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5840934-5845933 Arabidopsis thaliana
AT5G17720 5.0kb downstream 5.0kb downstream 6720 true Chr5: 5845934-5852653 Arabidopsis thaliana
AT5G17720 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5847654-5852653 Arabidopsis thaliana
AT5G17720 10.0kb upstream 10.0kb upstream 11720 true Chr5: 5835934-5847653 Arabidopsis thaliana
AT5G17720 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5835934-5845933 Arabidopsis thaliana
AT5G17720 10.0kb downstream 10.0kb downstream 11720 true Chr5: 5845934-5857653 Arabidopsis thaliana
AT5G17720 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5847654-5857653 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380987 5261 Brassicaceae View MSA
123803000 5264 Brassicales-Malvales View MSA
124300143 5266 SBM View MSA
124151397 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.431        

0 Strain