Gene : AT5G17750 A. thaliana TAIR10
Defline:  (1 of 5) PTHR23070:SF35 - AAA DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1686
Name:  ? AT5G17750 Secondary Identifier:  ? PAC:19665644
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17750 0.5kb upstream 0.5kb upstream 1847 true Chr5: 5858695-5860541 Arabidopsis thaliana
AT5G17750 0.5kb upstream 0.5kb upstream 500 false Chr5: 5860042-5860541 Arabidopsis thaliana
AT5G17750 0.5kb downstream 0.5kb downstream 1847 true Chr5: 5858195-5860041 Arabidopsis thaliana
AT5G17750 0.5kb downstream 0.5kb downstream 500 false Chr5: 5858195-5858694 Arabidopsis thaliana
AT5G17750 1.0kb upstream 1.0kb upstream 2347 true Chr5: 5858695-5861041 Arabidopsis thaliana
AT5G17750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5860042-5861041 Arabidopsis thaliana
AT5G17750 1.0kb downstream 1.0kb downstream 2347 true Chr5: 5857695-5860041 Arabidopsis thaliana
AT5G17750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5857695-5858694 Arabidopsis thaliana
AT5G17750 2.0kb upstream 2.0kb upstream 3347 true Chr5: 5858695-5862041 Arabidopsis thaliana
AT5G17750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5860042-5862041 Arabidopsis thaliana
AT5G17750 2.0kb downstream 2.0kb downstream 3347 true Chr5: 5856695-5860041 Arabidopsis thaliana
AT5G17750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5856695-5858694 Arabidopsis thaliana
AT5G17750 5.0kb upstream 5.0kb upstream 6347 true Chr5: 5858695-5865041 Arabidopsis thaliana
AT5G17750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5860042-5865041 Arabidopsis thaliana
AT5G17750 5.0kb downstream 5.0kb downstream 6347 true Chr5: 5853695-5860041 Arabidopsis thaliana
AT5G17750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5853695-5858694 Arabidopsis thaliana
AT5G17750 10.0kb upstream 10.0kb upstream 11347 true Chr5: 5858695-5870041 Arabidopsis thaliana
AT5G17750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5860042-5870041 Arabidopsis thaliana
AT5G17750 10.0kb downstream 10.0kb downstream 11347 true Chr5: 5848695-5860041 Arabidopsis thaliana
AT5G17750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5848695-5858694 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330894 5261 Brassicaceae Singleton cluster - no MSA
123772112 5264 Brassicales-Malvales Singleton cluster - no MSA
124270633 5266 SBM Singleton cluster - no MSA
124255148 5268 Malvidae View MSA
124041662 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain