Gene : AT5G17560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12735//PTHR12735:SF6 - BOLA-LIKE PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1667
Name:  ? AT5G17560 Secondary Identifier:  ? PAC:19668424
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17560 0.5kb upstream 0.5kb upstream 1970 true Chr5: 5787954-5789923 Arabidopsis thaliana
AT5G17560 0.5kb upstream 0.5kb upstream 500 false Chr5: 5787954-5788453 Arabidopsis thaliana
AT5G17560 0.5kb downstream 0.5kb downstream 1970 true Chr5: 5788454-5790423 Arabidopsis thaliana
AT5G17560 0.5kb downstream 0.5kb downstream 500 false Chr5: 5789924-5790423 Arabidopsis thaliana
AT5G17560 1.0kb upstream 1.0kb upstream 2470 true Chr5: 5787454-5789923 Arabidopsis thaliana
AT5G17560 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5787454-5788453 Arabidopsis thaliana
AT5G17560 1.0kb downstream 1.0kb downstream 2470 true Chr5: 5788454-5790923 Arabidopsis thaliana
AT5G17560 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5789924-5790923 Arabidopsis thaliana
AT5G17560 2.0kb upstream 2.0kb upstream 3470 true Chr5: 5786454-5789923 Arabidopsis thaliana
AT5G17560 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5786454-5788453 Arabidopsis thaliana
AT5G17560 2.0kb downstream 2.0kb downstream 3470 true Chr5: 5788454-5791923 Arabidopsis thaliana
AT5G17560 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5789924-5791923 Arabidopsis thaliana
AT5G17560 5.0kb upstream 5.0kb upstream 6470 true Chr5: 5783454-5789923 Arabidopsis thaliana
AT5G17560 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5783454-5788453 Arabidopsis thaliana
AT5G17560 5.0kb downstream 5.0kb downstream 6470 true Chr5: 5788454-5794923 Arabidopsis thaliana
AT5G17560 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5789924-5794923 Arabidopsis thaliana
AT5G17560 10.0kb upstream 10.0kb upstream 11470 true Chr5: 5778454-5789923 Arabidopsis thaliana
AT5G17560 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5778454-5788453 Arabidopsis thaliana
AT5G17560 10.0kb downstream 10.0kb downstream 11470 true Chr5: 5788454-5799923 Arabidopsis thaliana
AT5G17560 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5789924-5799923 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026297 5273 Angiosperm View MSA
122376649 5261 Brassicaceae View MSA
123834948 5264 Brassicales-Malvales View MSA
124344762 5266 SBM View MSA
124238062 5268 Malvidae View MSA
124063649 5270 Rosid View MSA
123741221 5271 Pentapetalae View MSA
122794749 5272 Eudicot View MSA
121343923 5274 Embryophyte View MSA
123425423 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.384     High  
cufflinks 12.848       Low
cufflinks 45.298     High High
cufflinks 14.339        
cufflinks 41.856     High  
cufflinks 14.525        

0 Strain