Gene : AT5G17570 A. thaliana TAIR10
Defline:  (1 of 3) K03424 - TatD DNase family protein (tatD) Genomic Order:  1668
Name:  ? AT5G17570 Secondary Identifier:  ? PAC:19667768
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17570 0.5kb upstream 0.5kb upstream 2367 true Chr5: 5792426-5794792 Arabidopsis thaliana
AT5G17570 0.5kb upstream 0.5kb upstream 500 false Chr5: 5792426-5792925 Arabidopsis thaliana
AT5G17570 0.5kb downstream 0.5kb downstream 2367 true Chr5: 5792926-5795292 Arabidopsis thaliana
AT5G17570 0.5kb downstream 0.5kb downstream 500 false Chr5: 5794793-5795292 Arabidopsis thaliana
AT5G17570 1.0kb upstream 1.0kb upstream 2867 true Chr5: 5791926-5794792 Arabidopsis thaliana
AT5G17570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5791926-5792925 Arabidopsis thaliana
AT5G17570 1.0kb downstream 1.0kb downstream 2867 true Chr5: 5792926-5795792 Arabidopsis thaliana
AT5G17570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5794793-5795792 Arabidopsis thaliana
AT5G17570 2.0kb upstream 2.0kb upstream 3867 true Chr5: 5790926-5794792 Arabidopsis thaliana
AT5G17570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5790926-5792925 Arabidopsis thaliana
AT5G17570 2.0kb downstream 2.0kb downstream 3867 true Chr5: 5792926-5796792 Arabidopsis thaliana
AT5G17570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5794793-5796792 Arabidopsis thaliana
AT5G17570 5.0kb upstream 5.0kb upstream 6867 true Chr5: 5787926-5794792 Arabidopsis thaliana
AT5G17570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5787926-5792925 Arabidopsis thaliana
AT5G17570 5.0kb downstream 5.0kb downstream 6867 true Chr5: 5792926-5799792 Arabidopsis thaliana
AT5G17570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5794793-5799792 Arabidopsis thaliana
AT5G17570 10.0kb upstream 10.0kb upstream 11867 true Chr5: 5782926-5794792 Arabidopsis thaliana
AT5G17570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5782926-5792925 Arabidopsis thaliana
AT5G17570 10.0kb downstream 10.0kb downstream 11867 true Chr5: 5792926-5804792 Arabidopsis thaliana
AT5G17570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5794793-5804792 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362117 5261 Brassicaceae View MSA
123831019 5264 Brassicales-Malvales View MSA
124343445 5266 SBM View MSA
124238522 5268 Malvidae View MSA
124061063 5270 Rosid View MSA
123739501 5271 Pentapetalae View MSA
122793649 5272 Eudicot View MSA
122041796 5273 Angiosperm View MSA
121347272 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.934        
cufflinks 3.394        
cufflinks 3.288        
cufflinks 3.533       High
cufflinks 2.981        
cufflinks 2.96        

0 Strain