Gene : TBL16 A. thaliana TAIR10
Primary Identifier:  ? AT5G20680 Defline:  (1 of 1) PTHR32285//PTHR32285:SF5 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 16
Genomic Order:  2004 Name:  ? AT5G20680
Secondary Identifier:  ? PAC:19667557
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20680 0.5kb upstream 0.5kb upstream 4308 true Chr5: 6997603-7001910 Arabidopsis thaliana
AT5G20680 0.5kb upstream 0.5kb upstream 500 false Chr5: 6997603-6998102 Arabidopsis thaliana
AT5G20680 0.5kb downstream 0.5kb downstream 4308 true Chr5: 6998103-7002410 Arabidopsis thaliana
AT5G20680 0.5kb downstream 0.5kb downstream 500 false Chr5: 7001911-7002410 Arabidopsis thaliana
AT5G20680 1.0kb upstream 1.0kb upstream 4808 true Chr5: 6997103-7001910 Arabidopsis thaliana
AT5G20680 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6997103-6998102 Arabidopsis thaliana
AT5G20680 1.0kb downstream 1.0kb downstream 4808 true Chr5: 6998103-7002910 Arabidopsis thaliana
AT5G20680 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7001911-7002910 Arabidopsis thaliana
AT5G20680 2.0kb upstream 2.0kb upstream 5808 true Chr5: 6996103-7001910 Arabidopsis thaliana
AT5G20680 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6996103-6998102 Arabidopsis thaliana
AT5G20680 2.0kb downstream 2.0kb downstream 5808 true Chr5: 6998103-7003910 Arabidopsis thaliana
AT5G20680 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7001911-7003910 Arabidopsis thaliana
AT5G20680 5.0kb upstream 5.0kb upstream 8808 true Chr5: 6993103-7001910 Arabidopsis thaliana
AT5G20680 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6993103-6998102 Arabidopsis thaliana
AT5G20680 5.0kb downstream 5.0kb downstream 8808 true Chr5: 6998103-7006910 Arabidopsis thaliana
AT5G20680 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7001911-7006910 Arabidopsis thaliana
AT5G20680 10.0kb upstream 10.0kb upstream 13808 true Chr5: 6988103-7001910 Arabidopsis thaliana
AT5G20680 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6988103-6998102 Arabidopsis thaliana
AT5G20680 10.0kb downstream 10.0kb downstream 13808 true Chr5: 6998103-7011910 Arabidopsis thaliana
AT5G20680 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7001911-7011910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367487 5261 Brassicaceae View MSA
123839709 5264 Brassicales-Malvales View MSA
124343006 5266 SBM View MSA
124244172 5268 Malvidae View MSA
124073256 5270 Rosid View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.439        
cufflinks 1.94        
cufflinks 1.168       Low
cufflinks 2.303       High
cufflinks 1.19       Low
cufflinks 2.136        

0 Strain