Gene : AT5G20610 A. thaliana TAIR10
Defline:  (1 of 12) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  1996
Name:  ? AT5G20610 Secondary Identifier:  ? PAC:19671231
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20610 0.5kb upstream 0.5kb upstream 4806 true Chr5: 6968190-6972995 Arabidopsis thaliana
AT5G20610 0.5kb upstream 0.5kb upstream 500 false Chr5: 6968190-6968689 Arabidopsis thaliana
AT5G20610 0.5kb downstream 0.5kb downstream 4806 true Chr5: 6968690-6973495 Arabidopsis thaliana
AT5G20610 0.5kb downstream 0.5kb downstream 500 false Chr5: 6972996-6973495 Arabidopsis thaliana
AT5G20610 1.0kb upstream 1.0kb upstream 5306 true Chr5: 6967690-6972995 Arabidopsis thaliana
AT5G20610 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6967690-6968689 Arabidopsis thaliana
AT5G20610 1.0kb downstream 1.0kb downstream 5306 true Chr5: 6968690-6973995 Arabidopsis thaliana
AT5G20610 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6972996-6973995 Arabidopsis thaliana
AT5G20610 2.0kb upstream 2.0kb upstream 6306 true Chr5: 6966690-6972995 Arabidopsis thaliana
AT5G20610 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6966690-6968689 Arabidopsis thaliana
AT5G20610 2.0kb downstream 2.0kb downstream 6306 true Chr5: 6968690-6974995 Arabidopsis thaliana
AT5G20610 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6972996-6974995 Arabidopsis thaliana
AT5G20610 5.0kb upstream 5.0kb upstream 9306 true Chr5: 6963690-6972995 Arabidopsis thaliana
AT5G20610 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6963690-6968689 Arabidopsis thaliana
AT5G20610 5.0kb downstream 5.0kb downstream 9306 true Chr5: 6968690-6977995 Arabidopsis thaliana
AT5G20610 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6972996-6977995 Arabidopsis thaliana
AT5G20610 10.0kb upstream 10.0kb upstream 14306 true Chr5: 6958690-6972995 Arabidopsis thaliana
AT5G20610 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6958690-6968689 Arabidopsis thaliana
AT5G20610 10.0kb downstream 10.0kb downstream 14306 true Chr5: 6968690-6982995 Arabidopsis thaliana
AT5G20610 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6972996-6982995 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041160 5273 Angiosperm View MSA
122376711 5261 Brassicaceae View MSA
123835267 5264 Brassicales-Malvales View MSA
124341662 5266 SBM View MSA
124243752 5268 Malvidae View MSA
124072926 5270 Rosid View MSA
123747985 5271 Pentapetalae View MSA
122787610 5272 Eudicot View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.797        
cufflinks 13.237        
cufflinks 9.363       Low
cufflinks 13.795       High
cufflinks 9.485       Low
cufflinks 12.161        

0 Strain