Gene : AT5G20640 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31087//PTHR31087:SF3 - FAMILY NOT NAMED // PROTEIN LURP-ONE-RELATED 16-RELATED Genomic Order:  2000
Name:  ? AT5G20640 Secondary Identifier:  ? PAC:19671194
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20640 0.5kb upstream 0.5kb upstream 1626 true Chr5: 6983740-6985365 Arabidopsis thaliana
AT5G20640 0.5kb upstream 0.5kb upstream 500 false Chr5: 6983740-6984239 Arabidopsis thaliana
AT5G20640 0.5kb downstream 0.5kb downstream 1626 true Chr5: 6984240-6985865 Arabidopsis thaliana
AT5G20640 0.5kb downstream 0.5kb downstream 500 false Chr5: 6985366-6985865 Arabidopsis thaliana
AT5G20640 1.0kb upstream 1.0kb upstream 2126 true Chr5: 6983240-6985365 Arabidopsis thaliana
AT5G20640 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6983240-6984239 Arabidopsis thaliana
AT5G20640 1.0kb downstream 1.0kb downstream 2126 true Chr5: 6984240-6986365 Arabidopsis thaliana
AT5G20640 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6985366-6986365 Arabidopsis thaliana
AT5G20640 2.0kb upstream 2.0kb upstream 3126 true Chr5: 6982240-6985365 Arabidopsis thaliana
AT5G20640 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6982240-6984239 Arabidopsis thaliana
AT5G20640 2.0kb downstream 2.0kb downstream 3126 true Chr5: 6984240-6987365 Arabidopsis thaliana
AT5G20640 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6985366-6987365 Arabidopsis thaliana
AT5G20640 5.0kb upstream 5.0kb upstream 6126 true Chr5: 6979240-6985365 Arabidopsis thaliana
AT5G20640 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6979240-6984239 Arabidopsis thaliana
AT5G20640 5.0kb downstream 5.0kb downstream 6126 true Chr5: 6984240-6990365 Arabidopsis thaliana
AT5G20640 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6985366-6990365 Arabidopsis thaliana
AT5G20640 10.0kb upstream 10.0kb upstream 11126 true Chr5: 6974240-6985365 Arabidopsis thaliana
AT5G20640 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6974240-6984239 Arabidopsis thaliana
AT5G20640 10.0kb downstream 10.0kb downstream 11126 true Chr5: 6984240-6995365 Arabidopsis thaliana
AT5G20640 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6985366-6995365 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380336 5261 Brassicaceae View MSA
123829018 5264 Brassicales-Malvales View MSA
124337783 5266 SBM View MSA
124243247 5268 Malvidae View MSA
124061056 5270 Rosid View MSA
123740400 5271 Pentapetalae View MSA
122786459 5272 Eudicot View MSA
122042677 5273 Angiosperm View MSA
121309998 5274 Embryophyte View MSA
123347607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.504        
cufflinks 11.504       High
cufflinks 0.226     Low  
cufflinks 3.535        
cufflinks 0.151     Low Low
cufflinks 3.48        

0 Strain