Gene : AT5G20450 A. thaliana TAIR10
Defline:  (1 of 5) PTHR13140:SF390 - MYOSIN-11-RELATED Genomic Order:  1981
Name:  ? AT5G20450 Secondary Identifier:  ? PAC:19668171
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20450 0.5kb upstream 0.5kb upstream 3269 true Chr5: 6910549-6913817 Arabidopsis thaliana
AT5G20450 0.5kb upstream 0.5kb upstream 500 false Chr5: 6913318-6913817 Arabidopsis thaliana
AT5G20450 0.5kb downstream 0.5kb downstream 3269 true Chr5: 6910049-6913317 Arabidopsis thaliana
AT5G20450 0.5kb downstream 0.5kb downstream 500 false Chr5: 6910049-6910548 Arabidopsis thaliana
AT5G20450 1.0kb upstream 1.0kb upstream 3769 true Chr5: 6910549-6914317 Arabidopsis thaliana
AT5G20450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6913318-6914317 Arabidopsis thaliana
AT5G20450 1.0kb downstream 1.0kb downstream 3769 true Chr5: 6909549-6913317 Arabidopsis thaliana
AT5G20450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6909549-6910548 Arabidopsis thaliana
AT5G20450 2.0kb upstream 2.0kb upstream 4769 true Chr5: 6910549-6915317 Arabidopsis thaliana
AT5G20450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6913318-6915317 Arabidopsis thaliana
AT5G20450 2.0kb downstream 2.0kb downstream 4769 true Chr5: 6908549-6913317 Arabidopsis thaliana
AT5G20450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6908549-6910548 Arabidopsis thaliana
AT5G20450 5.0kb upstream 5.0kb upstream 7769 true Chr5: 6910549-6918317 Arabidopsis thaliana
AT5G20450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6913318-6918317 Arabidopsis thaliana
AT5G20450 5.0kb downstream 5.0kb downstream 7769 true Chr5: 6905549-6913317 Arabidopsis thaliana
AT5G20450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6905549-6910548 Arabidopsis thaliana
AT5G20450 10.0kb upstream 10.0kb upstream 12769 true Chr5: 6910549-6923317 Arabidopsis thaliana
AT5G20450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6913318-6923317 Arabidopsis thaliana
AT5G20450 10.0kb downstream 10.0kb downstream 12769 true Chr5: 6900549-6913317 Arabidopsis thaliana
AT5G20450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6900549-6910548 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495182 5273 Angiosperm Singleton cluster - no MSA
122331106 5261 Brassicaceae Singleton cluster - no MSA
123772311 5264 Brassicales-Malvales Singleton cluster - no MSA
124270830 5266 SBM Singleton cluster - no MSA
124126880 5268 Malvidae Singleton cluster - no MSA
123855763 5270 Rosid Singleton cluster - no MSA
123441729 5271 Pentapetalae Singleton cluster - no MSA
122477312 5272 Eudicot Singleton cluster - no MSA
120768549 5274 Embryophyte Singleton cluster - no MSA
123428306 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.659        
cufflinks 1.199        
cufflinks 0.554        
cufflinks 1.202        
cufflinks 0.436       Low
cufflinks 1.057        

0 Strain