Gene : AT5G20300 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10903:SF68 - TRANSLOCASE OF CHLOROPLAST 90, CHLOROPLASTIC Genomic Order:  1965
Name:  ? AT5G20300 Secondary Identifier:  ? PAC:19665789
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20300 0.5kb upstream 0.5kb upstream 4062 true Chr5: 6853416-6857477 Arabidopsis thaliana
AT5G20300 0.5kb upstream 0.5kb upstream 500 false Chr5: 6856978-6857477 Arabidopsis thaliana
AT5G20300 0.5kb downstream 0.5kb downstream 4062 true Chr5: 6852916-6856977 Arabidopsis thaliana
AT5G20300 0.5kb downstream 0.5kb downstream 500 false Chr5: 6852916-6853415 Arabidopsis thaliana
AT5G20300 1.0kb upstream 1.0kb upstream 4562 true Chr5: 6853416-6857977 Arabidopsis thaliana
AT5G20300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6856978-6857977 Arabidopsis thaliana
AT5G20300 1.0kb downstream 1.0kb downstream 4562 true Chr5: 6852416-6856977 Arabidopsis thaliana
AT5G20300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6852416-6853415 Arabidopsis thaliana
AT5G20300 2.0kb upstream 2.0kb upstream 5562 true Chr5: 6853416-6858977 Arabidopsis thaliana
AT5G20300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6856978-6858977 Arabidopsis thaliana
AT5G20300 2.0kb downstream 2.0kb downstream 5562 true Chr5: 6851416-6856977 Arabidopsis thaliana
AT5G20300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6851416-6853415 Arabidopsis thaliana
AT5G20300 5.0kb upstream 5.0kb upstream 8562 true Chr5: 6853416-6861977 Arabidopsis thaliana
AT5G20300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6856978-6861977 Arabidopsis thaliana
AT5G20300 5.0kb downstream 5.0kb downstream 8562 true Chr5: 6848416-6856977 Arabidopsis thaliana
AT5G20300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6848416-6853415 Arabidopsis thaliana
AT5G20300 10.0kb upstream 10.0kb upstream 13562 true Chr5: 6853416-6866977 Arabidopsis thaliana
AT5G20300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6856978-6866977 Arabidopsis thaliana
AT5G20300 10.0kb downstream 10.0kb downstream 13562 true Chr5: 6843416-6856977 Arabidopsis thaliana
AT5G20300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6843416-6853415 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363963 5261 Brassicaceae View MSA
123828290 5264 Brassicales-Malvales View MSA
124341560 5266 SBM View MSA
124242452 5268 Malvidae View MSA
124069161 5270 Rosid View MSA
123748605 5271 Pentapetalae View MSA
122793067 5272 Eudicot View MSA
122047543 5273 Angiosperm View MSA
121310755 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.969        
cufflinks 1.829        
cufflinks 2.8        
cufflinks 2.006        
cufflinks 2.987        
cufflinks 1.783       Low

0 Strain