Gene : AT5G20370 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33132:SF2 - SERINE-RICH PROTEIN-LIKE PROTEIN Genomic Order:  1972
Name:  ? AT5G20370 Secondary Identifier:  ? PAC:19668648
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20370 0.5kb upstream 0.5kb upstream 1028 true Chr5: 6886931-6887958 Arabidopsis thaliana
AT5G20370 0.5kb upstream 0.5kb upstream 500 false Chr5: 6887459-6887958 Arabidopsis thaliana
AT5G20370 0.5kb downstream 0.5kb downstream 1028 true Chr5: 6886431-6887458 Arabidopsis thaliana
AT5G20370 0.5kb downstream 0.5kb downstream 500 false Chr5: 6886431-6886930 Arabidopsis thaliana
AT5G20370 1.0kb upstream 1.0kb upstream 1528 true Chr5: 6886931-6888458 Arabidopsis thaliana
AT5G20370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6887459-6888458 Arabidopsis thaliana
AT5G20370 1.0kb downstream 1.0kb downstream 1528 true Chr5: 6885931-6887458 Arabidopsis thaliana
AT5G20370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6885931-6886930 Arabidopsis thaliana
AT5G20370 2.0kb upstream 2.0kb upstream 2528 true Chr5: 6886931-6889458 Arabidopsis thaliana
AT5G20370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6887459-6889458 Arabidopsis thaliana
AT5G20370 2.0kb downstream 2.0kb downstream 2528 true Chr5: 6884931-6887458 Arabidopsis thaliana
AT5G20370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6884931-6886930 Arabidopsis thaliana
AT5G20370 5.0kb upstream 5.0kb upstream 5528 true Chr5: 6886931-6892458 Arabidopsis thaliana
AT5G20370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6887459-6892458 Arabidopsis thaliana
AT5G20370 5.0kb downstream 5.0kb downstream 5528 true Chr5: 6881931-6887458 Arabidopsis thaliana
AT5G20370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6881931-6886930 Arabidopsis thaliana
AT5G20370 10.0kb upstream 10.0kb upstream 10528 true Chr5: 6886931-6897458 Arabidopsis thaliana
AT5G20370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6887459-6897458 Arabidopsis thaliana
AT5G20370 10.0kb downstream 10.0kb downstream 10528 true Chr5: 6876931-6887458 Arabidopsis thaliana
AT5G20370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6876931-6886930 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360908 5261 Brassicaceae View MSA
123798057 5264 Brassicales-Malvales View MSA
124295738 5266 SBM View MSA
124248143 5268 Malvidae View MSA
124051129 5270 Rosid View MSA
123742040 5271 Pentapetalae View MSA
122770182 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.171     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.233     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119     Low Low

0 Strain