Gene : AT5G20110 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11886//PTHR11886:SF51 - DYNEIN LIGHT CHAIN // SUBFAMILY NOT NAMED Genomic Order:  1945
Name:  ? AT5G20110 Secondary Identifier:  ? PAC:19671706
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20110 0.5kb upstream 0.5kb upstream 2360 true Chr5: 6791487-6793846 Arabidopsis thaliana
AT5G20110 0.5kb upstream 0.5kb upstream 500 false Chr5: 6793347-6793846 Arabidopsis thaliana
AT5G20110 0.5kb downstream 0.5kb downstream 2360 true Chr5: 6790987-6793346 Arabidopsis thaliana
AT5G20110 0.5kb downstream 0.5kb downstream 500 false Chr5: 6790987-6791486 Arabidopsis thaliana
AT5G20110 1.0kb upstream 1.0kb upstream 2860 true Chr5: 6791487-6794346 Arabidopsis thaliana
AT5G20110 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6793347-6794346 Arabidopsis thaliana
AT5G20110 1.0kb downstream 1.0kb downstream 2860 true Chr5: 6790487-6793346 Arabidopsis thaliana
AT5G20110 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6790487-6791486 Arabidopsis thaliana
AT5G20110 2.0kb upstream 2.0kb upstream 3860 true Chr5: 6791487-6795346 Arabidopsis thaliana
AT5G20110 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6793347-6795346 Arabidopsis thaliana
AT5G20110 2.0kb downstream 2.0kb downstream 3860 true Chr5: 6789487-6793346 Arabidopsis thaliana
AT5G20110 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6789487-6791486 Arabidopsis thaliana
AT5G20110 5.0kb upstream 5.0kb upstream 6860 true Chr5: 6791487-6798346 Arabidopsis thaliana
AT5G20110 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6793347-6798346 Arabidopsis thaliana
AT5G20110 5.0kb downstream 5.0kb downstream 6860 true Chr5: 6786487-6793346 Arabidopsis thaliana
AT5G20110 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6786487-6791486 Arabidopsis thaliana
AT5G20110 10.0kb upstream 10.0kb upstream 11860 true Chr5: 6791487-6803346 Arabidopsis thaliana
AT5G20110 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6793347-6803346 Arabidopsis thaliana
AT5G20110 10.0kb downstream 10.0kb downstream 11860 true Chr5: 6781487-6793346 Arabidopsis thaliana
AT5G20110 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6781487-6791486 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367948 5261 Brassicaceae View MSA
123835800 5264 Brassicales-Malvales View MSA
124341172 5266 SBM View MSA
124243825 5268 Malvidae View MSA
124066792 5270 Rosid View MSA
123747752 5271 Pentapetalae View MSA
122794062 5272 Eudicot View MSA
122048420 5273 Angiosperm View MSA
121310962 5274 Embryophyte View MSA
123348328 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.506       High
cufflinks 1.196       Low
cufflinks 2.303        
cufflinks 3.274        
cufflinks 2.706        
cufflinks 1.916        

0 Strain