Gene : RAN-1 A. thaliana TAIR10
Primary Identifier:  ? AT5G20010 Defline:  (1 of 2) PTHR24071//PTHR24071:SF7 - FAMILY NOT NAMED // GTP-BINDING NUCLEAR PROTEIN RAN-2
Genomic Order:  1934 Name:  ? AT5G20010
Secondary Identifier:  ? PAC:19670066
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Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ILEUDEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5136 Arabidopsis thaliana pathologic  
Athaliana PWY-5138 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-6435 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-735 Arabidopsis thaliana pathologic  
Athaliana PWY-7606 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20010 0.5kb upstream 0.5kb upstream 2311 true Chr5: 6759784-6762094 Arabidopsis thaliana
AT5G20010 0.5kb upstream 0.5kb upstream 500 false Chr5: 6759784-6760283 Arabidopsis thaliana
AT5G20010 0.5kb downstream 0.5kb downstream 2311 true Chr5: 6760284-6762594 Arabidopsis thaliana
AT5G20010 0.5kb downstream 0.5kb downstream 500 false Chr5: 6762095-6762594 Arabidopsis thaliana
AT5G20010 1.0kb upstream 1.0kb upstream 2811 true Chr5: 6759284-6762094 Arabidopsis thaliana
AT5G20010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6759284-6760283 Arabidopsis thaliana
AT5G20010 1.0kb downstream 1.0kb downstream 2811 true Chr5: 6760284-6763094 Arabidopsis thaliana
AT5G20010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6762095-6763094 Arabidopsis thaliana
AT5G20010 2.0kb upstream 2.0kb upstream 3811 true Chr5: 6758284-6762094 Arabidopsis thaliana
AT5G20010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6758284-6760283 Arabidopsis thaliana
AT5G20010 2.0kb downstream 2.0kb downstream 3811 true Chr5: 6760284-6764094 Arabidopsis thaliana
AT5G20010 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6762095-6764094 Arabidopsis thaliana
AT5G20010 5.0kb upstream 5.0kb upstream 6811 true Chr5: 6755284-6762094 Arabidopsis thaliana
AT5G20010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6755284-6760283 Arabidopsis thaliana
AT5G20010 5.0kb downstream 5.0kb downstream 6811 true Chr5: 6760284-6767094 Arabidopsis thaliana
AT5G20010 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6762095-6767094 Arabidopsis thaliana
AT5G20010 10.0kb upstream 10.0kb upstream 11811 true Chr5: 6750284-6762094 Arabidopsis thaliana
AT5G20010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6750284-6760283 Arabidopsis thaliana
AT5G20010 10.0kb downstream 10.0kb downstream 11811 true Chr5: 6760284-6772094 Arabidopsis thaliana
AT5G20010 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6762095-6772094 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343281 5261 Brassicaceae View MSA
123783529 5264 Brassicales-Malvales View MSA
124281758 5266 SBM View MSA
124136462 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 151.663     High High
cufflinks 126.759     High  
cufflinks 111.905     High  
cufflinks 115.309     High  
cufflinks 105.288     High Low
cufflinks 143.242     High  

0 Strain