Gene : AT5G19420 A. thaliana TAIR10
Defline:  (1 of 1) PF16627 - Unstructured region between BRX_N and BRX domain (BRX_assoc) Genomic Order:  1870
Name:  ? AT5G19420 Secondary Identifier:  ? PAC:19668126
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19420 0.5kb upstream 0.5kb upstream 6105 true Chr5: 6547638-6553742 Arabidopsis thaliana
AT5G19420 0.5kb upstream 0.5kb upstream 500 false Chr5: 6553243-6553742 Arabidopsis thaliana
AT5G19420 0.5kb downstream 0.5kb downstream 6105 true Chr5: 6547138-6553242 Arabidopsis thaliana
AT5G19420 0.5kb downstream 0.5kb downstream 500 false Chr5: 6547138-6547637 Arabidopsis thaliana
AT5G19420 1.0kb upstream 1.0kb upstream 6605 true Chr5: 6547638-6554242 Arabidopsis thaliana
AT5G19420 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6553243-6554242 Arabidopsis thaliana
AT5G19420 1.0kb downstream 1.0kb downstream 6605 true Chr5: 6546638-6553242 Arabidopsis thaliana
AT5G19420 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6546638-6547637 Arabidopsis thaliana
AT5G19420 2.0kb upstream 2.0kb upstream 7605 true Chr5: 6547638-6555242 Arabidopsis thaliana
AT5G19420 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6553243-6555242 Arabidopsis thaliana
AT5G19420 2.0kb downstream 2.0kb downstream 7605 true Chr5: 6545638-6553242 Arabidopsis thaliana
AT5G19420 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6545638-6547637 Arabidopsis thaliana
AT5G19420 5.0kb upstream 5.0kb upstream 10605 true Chr5: 6547638-6558242 Arabidopsis thaliana
AT5G19420 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6553243-6558242 Arabidopsis thaliana
AT5G19420 5.0kb downstream 5.0kb downstream 10605 true Chr5: 6542638-6553242 Arabidopsis thaliana
AT5G19420 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6542638-6547637 Arabidopsis thaliana
AT5G19420 10.0kb upstream 10.0kb upstream 15605 true Chr5: 6547638-6563242 Arabidopsis thaliana
AT5G19420 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6553243-6563242 Arabidopsis thaliana
AT5G19420 10.0kb downstream 10.0kb downstream 15605 true Chr5: 6537638-6553242 Arabidopsis thaliana
AT5G19420 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6537638-6547637 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360724 5261 Brassicaceae View MSA
123827646 5264 Brassicales-Malvales View MSA
124344597 5266 SBM View MSA
124238581 5268 Malvidae View MSA
124062866 5270 Rosid View MSA
123743329 5271 Pentapetalae View MSA
122789808 5272 Eudicot View MSA
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.262        
cufflinks 3.456        
cufflinks 1.672       Low
cufflinks 3.959       High
cufflinks 1.83        
cufflinks 3.685        

0 Strain