Gene : CDPK19 A. thaliana TAIR10
Primary Identifier:  ? AT5G19450 Defline:  (1 of 2) PTHR24349:SF116 - CALCIUM-DEPENDENT PROTEIN KINASE 7
Genomic Order:  1873 Name:  ? AT5G19450
Secondary Identifier:  ? PAC:19668316
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19450 0.5kb upstream 0.5kb upstream 4075 true Chr5: 6558426-6562500 Arabidopsis thaliana
AT5G19450 0.5kb upstream 0.5kb upstream 500 false Chr5: 6562001-6562500 Arabidopsis thaliana
AT5G19450 0.5kb downstream 0.5kb downstream 4075 true Chr5: 6557926-6562000 Arabidopsis thaliana
AT5G19450 0.5kb downstream 0.5kb downstream 500 false Chr5: 6557926-6558425 Arabidopsis thaliana
AT5G19450 1.0kb upstream 1.0kb upstream 4575 true Chr5: 6558426-6563000 Arabidopsis thaliana
AT5G19450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6562001-6563000 Arabidopsis thaliana
AT5G19450 1.0kb downstream 1.0kb downstream 4575 true Chr5: 6557426-6562000 Arabidopsis thaliana
AT5G19450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6557426-6558425 Arabidopsis thaliana
AT5G19450 2.0kb upstream 2.0kb upstream 5575 true Chr5: 6558426-6564000 Arabidopsis thaliana
AT5G19450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6562001-6564000 Arabidopsis thaliana
AT5G19450 2.0kb downstream 2.0kb downstream 5575 true Chr5: 6556426-6562000 Arabidopsis thaliana
AT5G19450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6556426-6558425 Arabidopsis thaliana
AT5G19450 5.0kb upstream 5.0kb upstream 8575 true Chr5: 6558426-6567000 Arabidopsis thaliana
AT5G19450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6562001-6567000 Arabidopsis thaliana
AT5G19450 5.0kb downstream 5.0kb downstream 8575 true Chr5: 6553426-6562000 Arabidopsis thaliana
AT5G19450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6553426-6558425 Arabidopsis thaliana
AT5G19450 10.0kb upstream 10.0kb upstream 13575 true Chr5: 6558426-6572000 Arabidopsis thaliana
AT5G19450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6562001-6572000 Arabidopsis thaliana
AT5G19450 10.0kb downstream 10.0kb downstream 13575 true Chr5: 6548426-6562000 Arabidopsis thaliana
AT5G19450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6548426-6558425 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377643 5261 Brassicaceae View MSA
123836793 5264 Brassicales-Malvales View MSA
124342314 5266 SBM View MSA
124244480 5268 Malvidae View MSA
124061660 5270 Rosid View MSA
123751372 5271 Pentapetalae View MSA
122791900 5272 Eudicot View MSA
122045931 5273 Angiosperm View MSA
121348324 5274 Embryophyte View MSA
123380819 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.683        
cufflinks 14.904        
cufflinks 10.296       Low
cufflinks 15.892        
cufflinks 9.953       Low
cufflinks 17.055       High

0 Strain