Gene : AT5G19300 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12150:SF13 - DUF171 FAMILY PROTEIN Genomic Order:  1857
Name:  ? AT5G19300 Secondary Identifier:  ? PAC:19672198
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19300 0.5kb upstream 0.5kb upstream 3139 true Chr5: 6495076-6498214 Arabidopsis thaliana
AT5G19300 0.5kb upstream 0.5kb upstream 500 false Chr5: 6495076-6495575 Arabidopsis thaliana
AT5G19300 0.5kb downstream 0.5kb downstream 3139 true Chr5: 6495576-6498714 Arabidopsis thaliana
AT5G19300 0.5kb downstream 0.5kb downstream 500 false Chr5: 6498215-6498714 Arabidopsis thaliana
AT5G19300 1.0kb upstream 1.0kb upstream 3639 true Chr5: 6494576-6498214 Arabidopsis thaliana
AT5G19300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6494576-6495575 Arabidopsis thaliana
AT5G19300 1.0kb downstream 1.0kb downstream 3639 true Chr5: 6495576-6499214 Arabidopsis thaliana
AT5G19300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6498215-6499214 Arabidopsis thaliana
AT5G19300 2.0kb upstream 2.0kb upstream 4639 true Chr5: 6493576-6498214 Arabidopsis thaliana
AT5G19300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6493576-6495575 Arabidopsis thaliana
AT5G19300 2.0kb downstream 2.0kb downstream 4639 true Chr5: 6495576-6500214 Arabidopsis thaliana
AT5G19300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6498215-6500214 Arabidopsis thaliana
AT5G19300 5.0kb upstream 5.0kb upstream 7639 true Chr5: 6490576-6498214 Arabidopsis thaliana
AT5G19300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6490576-6495575 Arabidopsis thaliana
AT5G19300 5.0kb downstream 5.0kb downstream 7639 true Chr5: 6495576-6503214 Arabidopsis thaliana
AT5G19300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6498215-6503214 Arabidopsis thaliana
AT5G19300 10.0kb upstream 10.0kb upstream 12639 true Chr5: 6485576-6498214 Arabidopsis thaliana
AT5G19300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6485576-6495575 Arabidopsis thaliana
AT5G19300 10.0kb downstream 10.0kb downstream 12639 true Chr5: 6495576-6508214 Arabidopsis thaliana
AT5G19300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6498215-6508214 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371282 5261 Brassicaceae View MSA
123828315 5264 Brassicales-Malvales View MSA
124337542 5266 SBM View MSA
124240623 5268 Malvidae View MSA
124066028 5270 Rosid View MSA
123736407 5271 Pentapetalae View MSA
122788915 5272 Eudicot View MSA
122044341 5273 Angiosperm View MSA
121344963 5274 Embryophyte View MSA
123425099 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.273        
cufflinks 6.134        
cufflinks 2.25       Low
cufflinks 6.73        
cufflinks 2.139       Low
cufflinks 7.018        

0 Strain