Gene : AT5G22730 A. thaliana TAIR10
Defline:  (1 of 68) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  2143
Name:  ? AT5G22730 Secondary Identifier:  ? PAC:19669900
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22730 0.5kb upstream 0.5kb upstream 2524 true Chr5: 7551429-7553952 Arabidopsis thaliana
AT5G22730 0.5kb upstream 0.5kb upstream 500 false Chr5: 7553453-7553952 Arabidopsis thaliana
AT5G22730 0.5kb downstream 0.5kb downstream 2524 true Chr5: 7550929-7553452 Arabidopsis thaliana
AT5G22730 0.5kb downstream 0.5kb downstream 500 false Chr5: 7550929-7551428 Arabidopsis thaliana
AT5G22730 1.0kb upstream 1.0kb upstream 3024 true Chr5: 7551429-7554452 Arabidopsis thaliana
AT5G22730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7553453-7554452 Arabidopsis thaliana
AT5G22730 1.0kb downstream 1.0kb downstream 3024 true Chr5: 7550429-7553452 Arabidopsis thaliana
AT5G22730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7550429-7551428 Arabidopsis thaliana
AT5G22730 2.0kb upstream 2.0kb upstream 4024 true Chr5: 7551429-7555452 Arabidopsis thaliana
AT5G22730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7553453-7555452 Arabidopsis thaliana
AT5G22730 2.0kb downstream 2.0kb downstream 4024 true Chr5: 7549429-7553452 Arabidopsis thaliana
AT5G22730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7549429-7551428 Arabidopsis thaliana
AT5G22730 5.0kb upstream 5.0kb upstream 7024 true Chr5: 7551429-7558452 Arabidopsis thaliana
AT5G22730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7553453-7558452 Arabidopsis thaliana
AT5G22730 5.0kb downstream 5.0kb downstream 7024 true Chr5: 7546429-7553452 Arabidopsis thaliana
AT5G22730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7546429-7551428 Arabidopsis thaliana
AT5G22730 10.0kb upstream 10.0kb upstream 12024 true Chr5: 7551429-7563452 Arabidopsis thaliana
AT5G22730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7553453-7563452 Arabidopsis thaliana
AT5G22730 10.0kb downstream 10.0kb downstream 12024 true Chr5: 7541429-7553452 Arabidopsis thaliana
AT5G22730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7541429-7551428 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379663 5261 Brassicaceae View MSA
123840956 5264 Brassicales-Malvales View MSA
124350537 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.694        
cufflinks 9.278       High
cufflinks 5.178       Low
cufflinks 9.292       High
cufflinks 5.261        
cufflinks 8.023        

0 Strain