Gene : AT5G22580 A. thaliana TAIR10
Defline:  (1 of 5) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  2128
Name:  ? AT5G22580 Secondary Identifier:  ? PAC:19671582
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22580 0.5kb upstream 0.5kb upstream 1276 true Chr5: 7502174-7503449 Arabidopsis thaliana
AT5G22580 0.5kb upstream 0.5kb upstream 500 false Chr5: 7502174-7502673 Arabidopsis thaliana
AT5G22580 0.5kb downstream 0.5kb downstream 1276 true Chr5: 7502674-7503949 Arabidopsis thaliana
AT5G22580 0.5kb downstream 0.5kb downstream 500 false Chr5: 7503450-7503949 Arabidopsis thaliana
AT5G22580 1.0kb upstream 1.0kb upstream 1776 true Chr5: 7501674-7503449 Arabidopsis thaliana
AT5G22580 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7501674-7502673 Arabidopsis thaliana
AT5G22580 1.0kb downstream 1.0kb downstream 1776 true Chr5: 7502674-7504449 Arabidopsis thaliana
AT5G22580 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7503450-7504449 Arabidopsis thaliana
AT5G22580 2.0kb upstream 2.0kb upstream 2776 true Chr5: 7500674-7503449 Arabidopsis thaliana
AT5G22580 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7500674-7502673 Arabidopsis thaliana
AT5G22580 2.0kb downstream 2.0kb downstream 2776 true Chr5: 7502674-7505449 Arabidopsis thaliana
AT5G22580 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7503450-7505449 Arabidopsis thaliana
AT5G22580 5.0kb upstream 5.0kb upstream 5776 true Chr5: 7497674-7503449 Arabidopsis thaliana
AT5G22580 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7497674-7502673 Arabidopsis thaliana
AT5G22580 5.0kb downstream 5.0kb downstream 5776 true Chr5: 7502674-7508449 Arabidopsis thaliana
AT5G22580 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7503450-7508449 Arabidopsis thaliana
AT5G22580 10.0kb upstream 10.0kb upstream 10776 true Chr5: 7492674-7503449 Arabidopsis thaliana
AT5G22580 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7492674-7502673 Arabidopsis thaliana
AT5G22580 10.0kb downstream 10.0kb downstream 10776 true Chr5: 7502674-7513449 Arabidopsis thaliana
AT5G22580 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7503450-7513449 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371148 5261 Brassicaceae View MSA
123839240 5264 Brassicales-Malvales View MSA
124350224 5266 SBM View MSA
124240316 5268 Malvidae View MSA
124067116 5270 Rosid View MSA
123738780 5271 Pentapetalae View MSA
122790707 5272 Eudicot View MSA
122046282 5273 Angiosperm View MSA
121347337 5274 Embryophyte View MSA
123380530 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 174.187     High  
cufflinks 4.293        
cufflinks 164.847     High  
cufflinks 3.048       Low
cufflinks 150.626     High  
cufflinks 3.822        

0 Strain