Gene : NAC090 A. thaliana TAIR10
Primary Identifier:  ? AT5G22380 Defline:  (1 of 2) PTHR31989//PTHR31989:SF4 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 61-RELATED
Genomic Order:  2106 Name:  ? AT5G22380
Secondary Identifier:  ? PAC:19667091
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22380 0.5kb upstream 0.5kb upstream 1826 true Chr5: 7408777-7410602 Arabidopsis thaliana
AT5G22380 0.5kb upstream 0.5kb upstream 500 false Chr5: 7410103-7410602 Arabidopsis thaliana
AT5G22380 0.5kb downstream 0.5kb downstream 1826 true Chr5: 7408277-7410102 Arabidopsis thaliana
AT5G22380 0.5kb downstream 0.5kb downstream 500 false Chr5: 7408277-7408776 Arabidopsis thaliana
AT5G22380 1.0kb upstream 1.0kb upstream 2326 true Chr5: 7408777-7411102 Arabidopsis thaliana
AT5G22380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7410103-7411102 Arabidopsis thaliana
AT5G22380 1.0kb downstream 1.0kb downstream 2326 true Chr5: 7407777-7410102 Arabidopsis thaliana
AT5G22380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7407777-7408776 Arabidopsis thaliana
AT5G22380 2.0kb upstream 2.0kb upstream 3326 true Chr5: 7408777-7412102 Arabidopsis thaliana
AT5G22380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7410103-7412102 Arabidopsis thaliana
AT5G22380 2.0kb downstream 2.0kb downstream 3326 true Chr5: 7406777-7410102 Arabidopsis thaliana
AT5G22380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7406777-7408776 Arabidopsis thaliana
AT5G22380 5.0kb upstream 5.0kb upstream 6326 true Chr5: 7408777-7415102 Arabidopsis thaliana
AT5G22380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7410103-7415102 Arabidopsis thaliana
AT5G22380 5.0kb downstream 5.0kb downstream 6326 true Chr5: 7403777-7410102 Arabidopsis thaliana
AT5G22380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7403777-7408776 Arabidopsis thaliana
AT5G22380 10.0kb upstream 10.0kb upstream 11326 true Chr5: 7408777-7420102 Arabidopsis thaliana
AT5G22380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7410103-7420102 Arabidopsis thaliana
AT5G22380 10.0kb downstream 10.0kb downstream 11326 true Chr5: 7398777-7410102 Arabidopsis thaliana
AT5G22380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7398777-7408776 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364733 5261 Brassicaceae View MSA
123839426 5264 Brassicales-Malvales View MSA
124346056 5266 SBM View MSA
124246448 5268 Malvidae View MSA
124064044 5270 Rosid View MSA
123746448 5271 Pentapetalae View MSA
122785794 5272 Eudicot View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.41     High High
cufflinks 4.429        
cufflinks 4.233        
cufflinks 2.895        
cufflinks 3.25        
cufflinks 2.258        

0 Strain