Gene : AT5G22390 A. thaliana TAIR10
Defline:  (1 of 10) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  2107
Name:  ? AT5G22390 Secondary Identifier:  ? PAC:19667043
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22390 0.5kb upstream 0.5kb upstream 1634 true Chr5: 7418116-7419749 Arabidopsis thaliana
AT5G22390 0.5kb upstream 0.5kb upstream 500 false Chr5: 7419250-7419749 Arabidopsis thaliana
AT5G22390 0.5kb downstream 0.5kb downstream 1634 true Chr5: 7417616-7419249 Arabidopsis thaliana
AT5G22390 0.5kb downstream 0.5kb downstream 500 false Chr5: 7417616-7418115 Arabidopsis thaliana
AT5G22390 1.0kb upstream 1.0kb upstream 2134 true Chr5: 7418116-7420249 Arabidopsis thaliana
AT5G22390 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7419250-7420249 Arabidopsis thaliana
AT5G22390 1.0kb downstream 1.0kb downstream 2134 true Chr5: 7417116-7419249 Arabidopsis thaliana
AT5G22390 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7417116-7418115 Arabidopsis thaliana
AT5G22390 2.0kb upstream 2.0kb upstream 3134 true Chr5: 7418116-7421249 Arabidopsis thaliana
AT5G22390 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7419250-7421249 Arabidopsis thaliana
AT5G22390 2.0kb downstream 2.0kb downstream 3134 true Chr5: 7416116-7419249 Arabidopsis thaliana
AT5G22390 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7416116-7418115 Arabidopsis thaliana
AT5G22390 5.0kb upstream 5.0kb upstream 6134 true Chr5: 7418116-7424249 Arabidopsis thaliana
AT5G22390 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7419250-7424249 Arabidopsis thaliana
AT5G22390 5.0kb downstream 5.0kb downstream 6134 true Chr5: 7413116-7419249 Arabidopsis thaliana
AT5G22390 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7413116-7418115 Arabidopsis thaliana
AT5G22390 10.0kb upstream 10.0kb upstream 11134 true Chr5: 7418116-7429249 Arabidopsis thaliana
AT5G22390 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7419250-7429249 Arabidopsis thaliana
AT5G22390 10.0kb downstream 10.0kb downstream 11134 true Chr5: 7408116-7419249 Arabidopsis thaliana
AT5G22390 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7408116-7418115 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367406 5261 Brassicaceae View MSA
123835656 5264 Brassicales-Malvales View MSA
124348000 5266 SBM View MSA
124244305 5268 Malvidae View MSA
124069598 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.136        
cufflinks 5.213        
cufflinks 9.631        
cufflinks 5.46        
cufflinks 8.944        
cufflinks 2.202       Low

0 Strain